Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20873	Tnrc11	trinucleotide repeat containing 11 (THR-associated protein)	X		59024
Gene Ontology	ATP binding | DNA binding | DNA metabolism | DNA topoisomerase (ATP-hydrolyzing) activity | DNA topological change
Human Homolog	TNRC11[trinucleotide repeat containing 11 (THR-associated protein, 230kDa subunit)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGGGAGGGG GAGGAAAAAA (2) 3.2 0.0032 Cb medulloblastoma ACTCCGTTGA CTGGGAGGGG 11.5 0.0115 P8 GC+1d culture ACTCCGTTGA CTGGGAGGGG 3.4 0.0034 P8 GC+SHH+1d culture ACTCCGTTGA CTGGGAGGGG GAGGAAAAAA (2) 4.7 0.0047 3T3 fibroblasts ACTCCGTTGA 7 0.007 E15 cortex ACTCCGTTGA CTGGGAGGGG 14.8 0.0148 P1 cortex CTGGGAGGGG 22.7 0.0227 Hypothalamus CTGGGAGGGG 1.8 0.0018 E12.5 retina ACTCCGTTGA CTGGGAGGGG GAGGAAAAAA (2) 5.7 0.0057 E14.5 retina CTGGGAGGGG GAGGAAAAAA (2) 3.6 0.0036 E16.5 retina CTGGGAGGGG GAGGAAAAAA (2) 7.2 0.0072 E18.5 retina ACTCCGTTGA GAGGAAAACA (2) 5.4 0.0054 P0.5 retina ACTCCGTTGA CTGGGAGGGG 4 0.004 P2.5 retina ACTCCGTTGA CTGGGAGGGG GAGGAAAAAA (2) 7.1 0.0071 P4.5 retina CTGGGAGGGG 2 0.002 P6.5 retina ACTCCGTTGA CTGGGAGGGG GAGGAAAAAA (2) 13.4 0.0134 Adult retinal CTGGGAGGGG GAGGAAAAAA (2) 13 0.013 ONL GAGGAAAAAA (2) GAGGAAAACA (2) 3.8 0.0038