Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.208883	Psma5	proteasome (prosome, macropain) subunit, alpha type 5	3		26442
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | peptidase activity | proteasome core complex (sensu Eukarya) | ubiquitin-dependent protein catabolism
Human Homolog	PSMA5[proteasome (prosome, macropain) subunit, alpha type, 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACATAAGAGC GAAAAAATAA (3) GAAAATATCC GGAAAAAATC GGAGGAAGAA TGGAAATTCT TTCCTCACTC (2) TTTCCCAAAA 39 0.039 Cb medulloblastoma GAAAATATCC TTTCCCAAAA 11.5 0.0115 P8 GC+1d culture GAAAAAATAA (3) GAAAATATCC GGAGGAAGAA TTTCCCAAAA 43.3 0.0433 P8 GC+SHH+1d culture GAAAAAATAA (3) GAAAATATCC GAAAATTTCC GGAAAAAATC TGAAACAGTT (2) TTTCCCAAAA 33.9 0.0339 3T3 fibroblasts GAAAATATCC 3.5 0.0035 E15 cortex GAAAATATCC GGAAATATCC 24.7 0.0247 P1 cortex GAAAATATCC TGAAACAGTT (2) 13.6 0.0136 Hypothalamus ACATAAGAGC GAAAATATCC TGGAAATTCT TTCCTCACTC (2) 21.7 0.0217 E12.5 retina ACATAAGAGC GAAAAAATAA (3) GAAAATATCC GAAAATTTCC TTTCCCAAAA 37.7 0.0377 E14.5 retina GAAAAAATAA (3) GAAAATATCC GAAAATTTCC TGGAAATTCT TTTCCCAAAA 38.2 0.0382 E16.5 retina GAAAATATCC GAAAATTTCC GGAAAAAATC TGAAACAGTT (2) TTTCCCAAAA 41.6 0.0416 E18.5 retina ACATAAGAGC GAAAAAATAA (3) GAAAATATCC GAAAATTTCC GGAAATATCC TGGAAATTCT 56.3 0.0563 P0.5 retina GAAAATATCC TGAAACAGTT (2) TGGAAATTCT 19.7 0.0197 P2.5 retina ACATAAGAGC GAAAAAATAA (3) GAAAATATCC GAAAATTTCC TTTCCCAAAA 26.4 0.0264 P4.5 retina GAAAAAATAA (3) GAAAATATCC GAAAATTTCC TTTCCCAAAA 35.7 0.0357 P6.5 retina GAAAAAATAA (3) GAAAATATCC GGAGGAAGAA TTTCCCAAAA 28.4 0.0284 P10.5 crx- retina GAAAAAATAA (3) GAAAATATCC GGAGGAAGAA TGAAACAGTT (2) TTTCCCAAAA 35.4 0.0354 P10.5 crx+ retina GAAAAAATAA (3) GAAAATATCC GAAAATTTCC TGAAACAGTT (2) 26.8 0.0268 Adult retinal GAAAATATCC GGAAATATCC 9.3 0.0093 ONL GAAAAAATAA (3) GAAAATATCC TTCCTCACTC (2) TTTCCCAAAA 21 0.021