Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.209041
Nope
neighbor of Punc E11
9
56741
Gene Ontology
integral to plasma membrane
Human Homolog
NOPE[likely ortholog of mouse neighbor of Punc E11]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
3
)
TATCTGTCCC
55.5
0.0555
Cb medulloblastoma
CCTTTAATCC (
3
)
TATCTGTCCC
46.2
0.0462
P8 GC+1d culture
CCTTTAATCC (
3
)
TCTGCTTCAG
33.1
0.0331
P8 GC+SHH+1d culture
CCTTTAATCC (
3
)
GCAAAGGACA (
2
)
TATCTGTCCC
32.9
0.0329
3T3 fibroblasts
CCTTTAATCC (
3
)
GCAAAGGACA (
2
)
84.1
0.0841
E15 cortex
CCTTTAATCC (
3
)
TATCTGTCCC
59.3
0.0593
P1 cortex
CCTTTAATCC (
3
)
154.5
0.1545
Hypothalamus
ATGGTGGAAA (
3
)
CCTTTAATCC (
3
)
TATCTGTCCC
28.9
0.0289
E12.5 retina
CCTTTAATCC (
3
)
TATCTGTCCC
77
0.077
E14.5 retina
CCTTTAATCC (
3
)
120.3
0.1203
E16.5 retina
CCTTTAATCC (
3
)
TATCTGTCCC
TCTGCTTCAG
74.2
0.0742
E18.5 retina
CCTTTAATCC (
3
)
TATCTGTCCC
29.1
0.0291
P0.5 retina
CCTTTAATCC (
3
)
TATCTGTCCC
74.6
0.0746
P2.5 retina
CCTTTAATCC (
3
)
TATCTGTCCC
79.2
0.0792
P4.5 retina
CCTTTAATCC (
3
)
TATCTGTCCC
51.5
0.0515
P6.5 retina
CCTTTAATCC (
3
)
70
0.07
P10.5 crx- retina
CCTTTAATCC (
3
)
63.2
0.0632
P10.5 crx+ retina
CCTTTAATCC (
3
)
TATCTGTCCC
40.3
0.0403
Adult retinal
CCTTTAATCC (
3
)
TCTGCTTCAG
131.5
0.1315
ONL
CCTTTAATCC (
3
)
TCTGCTTCAG
86.2
0.0862
