| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAGGCAGAAC
| 3.3 | 0.0033 |
| Cb medulloblastoma | CAGGCAGAAC TATTTATTTT (3)
| 6.9 | 0.0069 |
| P8 GC+1d culture | CAATCCATCT CAGGCAGAAC CCCTCCACCA (2) TGAAGGTCAG (2)
| 6.8 | 0.0068 |
| P8 GC+SHH+1d culture | CAATCCATCT CAGGCAGAAC TGAAGGTCAG (2)
| 4.7 | 0.0047 |
| 3T3 fibroblasts | GTCATAGCTG (2) GTGGAGGCAG (2)
| 14 | 0.014 |
| E15 cortex | CCCTCCACCA (2) GTCATAGCTG (2)
| 9.8 | 0.0098 |
| P1 cortex | CAGGCAGAAC
| 4.5 | 0.0045 |
| E12.5 retina | CAGGCAGAAC
| 3.8 | 0.0038 |
| E14.5 retina | CAGGCAGAAC TATTTATTTT (3)
| 9.1 | 0.0091 |
| E16.5 retina | ATCCTGCCTG (2) CAGGCAGAAC
| 14.5 | 0.0145 |
| E18.5 retina | CAGGCAGAAC TGAAGGTCAG (2)
| 9.1 | 0.0091 |
| P0.5 retina | CAATCCATCT CAGGCAGAAC GTCATAGCTG (2)
| 7.9 | 0.0079 |
| P2.5 retina | CAGGCAGAAC GTCATAGCTG (2)
| 7.1 | 0.0071 |
| P4.5 retina | ATCCTGCCTG (2) CAGGCAGAAC GTCATAGCTG (2)
| 13.9 | 0.0139 |
| P6.5 retina | ATCCTGCCTG (2) CAGGCAGAAC GTCATAGCTG (2)
| 10 | 0.01 |
| P10.5 crx- retina | CAGGCAGAAC
| 1.9 | 0.0019 |
| P10.5 crx+ retina | CAGGCAGAAC GTGGAGGCAG (2)
| 7.7 | 0.0077 |
| Adult retinal | ATCCTGCCTG (2) CAGGCAGAAC CCCTCCACCA (2) GTCATAGCTG (2) GTGGAGGCAG (2) TATTTATTTT (3)
| 13.2 | 0.0132 |
| ONL | ATCCTGCCTG (2) CAGGCAGAAC GTCATAGCTG (2) TGAAGGTCAG (2)
| 26.7 | 0.0267 |