Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.212889	Phka1	phosphorylase kinase alpha 1	X	X 39.0 cM	18679
Gene Ontology	calmodulin binding | glycogen metabolism | kinase activity | muscle development | phosphorylase kinase activity | phosphorylase kinase complex | transferase activity
Human Homolog	PHKA1[phosphorylase kinase, alpha 1 (muscle)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTATTTAATT (2) GCTTCCTTCT TGGTTACTGG TGTGAGAGAG (2) 11.3 0.0113 Cb medulloblastoma AAGAAAAGTG (2) CTATTTAATT (2) 9.2 0.0092 P8 GC+1d culture AAGAAAAGTG (2) CTATTTAATT (2) GCTTCCTTCT 5.7 0.0057 P8 GC+SHH+1d culture CTATTTAATT (2) GCTTCCTTCT TGGTTACTGG 5.8 0.0058 E15 cortex CTATTTAATT (2) TGGTTACTGG 14.8 0.0148 Hypothalamus AACACACACA (5) AAGAAAAGTG (2) CTATTTAATT (2) CTGGCCAAAA TGGTTACTGG TGTGAGAGAG (2) 14.4 0.0144 E12.5 retina CTATTTAATT (2) TGGTTACTGG 5.7 0.0057 E14.5 retina AACACACACA (5) CTATTTAATT (2) GCGGGGGGAC TGGTTACTGG 20 0.02 E16.5 retina AACACACACA (5) CTATTTAATT (2) TGGTTACTGG 25.3 0.0253 E18.5 retina AAGAAAAGTG (2) CTATTTAATT (2) CTGGCCAAAA TGGTTACTGG 12.7 0.0127 P0.5 retina AAGAAAAGTG (2) CTATTTAATT (2) TGGTTACTGG 9.8 0.0098 P2.5 retina CTATTTAATT (2) CTGGCCAAAA TGGTTACTGG 12.3 0.0123 P4.5 retina AACACACACA (5) CTATTTAATT (2) GCTTCCTTCT 15.9 0.0159 P6.5 retina AACACACACA (5) CTATTTAATT (2) GCGGGGGGAC 8.4 0.0084 P10.5 crx- retina AAGAAAAGTG (2) CTATTTAATT (2) TGGTTACTGG 7.5 0.0075 P10.5 crx+ retina AACACACACA (5) AAGAAAAGTG (2) CTATTTAATT (2) TGGTTACTGG 11.4 0.0114 Adult retinal AACACACACA (5) 3.7 0.0037 ONL AACACACACA (5) CTATTTAATT (2) GCGGGGGGAC GCTTCCTTCT TGGTTACTGG TGTGAGAGAG (2) 21 0.021