Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.212889	Phka1	phosphorylase kinase alpha 1	X	X 39.0 cM	18679
Gene Ontology	calmodulin binding | glycogen metabolism | kinase activity | muscle development | phosphorylase kinase activity | phosphorylase kinase complex | transferase activity
Human Homolog	PHKA1[phosphorylase kinase, alpha 1 (muscle)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTATTTAATT (4) 6.5 0.0065 P8 Cb GC GCTTCCTTCT (2) 1.6 0.0016 P8 Cb GC TGGTTACTGG (10) 1.6 0.0016 P8 Cb GC TGTGAGAGAG (2) 1.6 0.0016 Cb medulloblastoma CTATTTAATT (4) 6.9 0.0069 Cb medulloblastoma AAGAAAAGTG (4) 2.3 0.0023 P8 GC+1d culture CTATTTAATT (4) 2.3 0.0023 P8 GC+1d culture GCTTCCTTCT (2) 2.3 0.0023 P8 GC+1d culture AAGAAAAGTG (4) 1.1 0.0011 P8 GC+SHH+1d culture CTATTTAATT (4) 2.3 0.0023 P8 GC+SHH+1d culture TGGTTACTGG (10) 2.3 0.0023 P8 GC+SHH+1d culture GCTTCCTTCT (2) 1.2 0.0012 E15 cortex TGGTTACTGG (10) 9.9 0.0099 E15 cortex CTATTTAATT (4) 4.9 0.0049 Hypothalamus AACACACACA (24) 5.4 0.0054 Hypothalamus AAGAAAAGTG (4) 1.8 0.0018 Hypothalamus CTATTTAATT (4) 1.8 0.0018 Hypothalamus CTGGCCAAAA (5) 1.8 0.0018 Hypothalamus TGGTTACTGG (10) 1.8 0.0018 Hypothalamus TGTGAGAGAG (2) 1.8 0.0018 E12.5 retina CTATTTAATT (4) 3.8 0.0038 E12.5 retina TGGTTACTGG (10) 1.9 0.0019 E14.5 retina TGGTTACTGG (10) 14.6 0.0146 E14.5 retina AACACACACA (24) 1.8 0.0018 E14.5 retina CTATTTAATT (4) 1.8 0.0018 E14.5 retina GCGGGGGGAC (2) 1.8 0.0018 E16.5 retina TGGTTACTGG (10) 19.9 0.0199 E16.5 retina CTATTTAATT (4) 3.6 0.0036 E16.5 retina AACACACACA (24) 1.8 0.0018 E18.5 retina AAGAAAAGTG (4) 5.5 0.0055 E18.5 retina CTATTTAATT (4) 3.6 0.0036 E18.5 retina CTGGCCAAAA (5) 1.8 0.0018 E18.5 retina TGGTTACTGG (10) 1.8 0.0018 P0.5 retina AAGAAAAGTG (4) 3.9 0.0039 P0.5 retina CTATTTAATT (4) 3.9 0.0039 P0.5 retina TGGTTACTGG (10) 2 0.002 P2.5 retina CTATTTAATT (4) 7 0.007 P2.5 retina CTGGCCAAAA (5) 3.5 0.0035 P2.5 retina TGGTTACTGG (10) 1.8 0.0018 P4.5 retina CTATTTAATT (4) 11.9 0.0119 P4.5 retina AACACACACA (24) 2 0.002 P4.5 retina GCTTCCTTCT (2) 2 0.002 P6.5 retina CTATTTAATT (4) 5 0.005 P6.5 retina AACACACACA (24) 1.7 0.0017 P6.5 retina GCGGGGGGAC (2) 1.7 0.0017 P10.5 crx- retina TGGTTACTGG (10) 3.7 0.0037 P10.5 crx- retina AAGAAAAGTG (4) 1.9 0.0019 P10.5 crx- retina CTATTTAATT (4) 1.9 0.0019 P10.5 crx+ retina AAGAAAAGTG (4) 3.8 0.0038 P10.5 crx+ retina CTATTTAATT (4) 3.8 0.0038 P10.5 crx+ retina AACACACACA (24) 1.9 0.0019 P10.5 crx+ retina TGGTTACTGG (10) 1.9 0.0019 Adult retinal AACACACACA (24) 3.7 0.0037 ONL TGGTTACTGG (10) 7.7 0.0077 ONL AACACACACA (24) 3.8 0.0038 ONL CTATTTAATT (4) 3.8 0.0038 ONL GCGGGGGGAC (2) 1.9 0.0019 ONL GCTTCCTTCT (2) 1.9 0.0019 ONL TGTGAGAGAG (2) 1.9 0.0019