Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.214973	Safb2	scaffold attachment factor B2	17		224902
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | RNA binding
Human Homolog	SAFB2[scaffold attachment factor B2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 89 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGTGGATGA GCCAGCCAGG (2) GCTAAAAAAA (2) GCTTCAGCCA GGAGGCAGAG (2) GGGGACTGAA TGTGCACCCT (2) 24.5 0.0245 Cb medulloblastoma AGAACTTTCC GAACCAGAAA GCCAGCCAGG (2) GCTAAAAAAA (2) GGAGGCAGAG (2) 23 0.023 P8 GC+1d culture AGAACTTTCC CTCTGTCACT (2) CTGTGGATGA GCCAGCCAGG (2) GCTAAAAAAA (2) GGAGGCAGAG (2) TGTGCACCCT (2) 24.9 0.0249 P8 GC+SHH+1d culture AGAACTTTCC CTGTGGATGA GCCAGCCAGG (2) GCTAAAAAAA (2) GGGAAGAGGA GGGGACTGAA TGTGCACCCT (2) 27 0.027 3T3 fibroblasts CTCTGTCACT (2) GCCAGCCAGG (2) GCTAAAAAAA (2) GGAGGCAGAG (2) TGTGCACCCT (2) 42 0.042 E15 cortex GCCAGCCAGG (2) GCTAAAAAAA (2) GGAGGCAGAG (2) 29.6 0.0296 P1 cortex AGAACTTTCC 9.1 0.0091 Hypothalamus AGAACTTTCC GCCAGCCAGG (2) GCTAAAAAAA (2) GGAGGCAGAG (2) GGGAAGAGGA 25.3 0.0253 E12.5 retina AGAACTTTCC GCCAGCCAGG (2) GGAGGCAGAG (2) TGTGCACCCT (2) 17 0.017 E14.5 retina AGAACTTTCC CTGTGGATGA GCCAGCCAGG (2) GGAGGCAGAG (2) 20 0.02 E16.5 retina GCCAGCCAGG (2) GCTAAAAAAA (2) GGAGGCAGAG (2) TGTGCACCCT (2) 14.4 0.0144 E18.5 retina GCCAGCCAGG (2) GGAGGCAGAG (2) TGTGCACCCT (2) 9.1 0.0091 P0.5 retina AGAACTTTCC AGAGTGGAGC CTGTGGATGA GCCAGCCAGG (2) GGAGGCAGAG (2) TGTGCACCCT (2) 33.5 0.0335 P2.5 retina AGAACTTTCC GCCAGCCAGG (2) GGAGGCAGAG (2) TGTGCACCCT (2) 28.1 0.0281 P4.5 retina AGAACTTTCC GCCAGCCAGG (2) GCTAAAAAAA (2) GCTTCAGCCA GGAGGCAGAG (2) TGTGCACCCT (2) 19.8 0.0198 P6.5 retina AGAACTTTCC CTCTGTCACT (2) CTGTGGATGA GCCAGCCAGG (2) GGAGGCAGAG (2) GGGAAGAGGA TGTGCACCCT (2) 21.8 0.0218 P10.5 crx- retina AGAACTTTCC CTCTGTCACT (2) GCCAGCCAGG (2) 5.7 0.0057 P10.5 crx+ retina CTCTGTCACT (2) GCCAGCCAGG (2) GGAGGCAGAG (2) 15.3 0.0153 Adult retinal GCCAGCCAGG (2) GGAGGCAGAG (2) TGTGCACCCT (2) 16.7 0.0167 ONL AGAACTTTCC GGAGGCAGAG (2) 7.6 0.0076