Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21539	A030012M09Rik	RIKEN cDNA A030012M09 gene	1		319263
Mm.21539	Cps1	carbamoyl-phosphate synthetase 1	1	1 43.4 cM	227231
Gene Ontology	carbamoyl-phosphate synthase (ammonia) activity
Human Homolog	CPS1[carbamoyl-phosphate synthetase 1, mitochondrial]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTAAAAAAA (2) GTTAAAAGAA (3) TATAATTTAT (4) TTAAAAAAAA (2) 21.2 0.0212 Cb medulloblastoma GTTAAAAAAA (2) TTAAAAAAAA (2) 78.6 0.0786 P8 GC+1d culture CTGTCTTCTG (2) GAGGGAGCCC (6) GTTAAAAAAA (2) GTTAAAAGAA (3) TATAATTTAT (4) TTAAAAAAAA (2) 48.9 0.0489 P8 GC+SHH+1d culture CTGTCTTCTG (2) GTTAAAAAAA (2) GTTAAAAGAA (3) TTAAAAAAAA (2) TTATTCTGTC (2) 57.4 0.0574 E15 cortex GGAGGAGCTG (4) TTAAAAAAAA (2) 9.8 0.0098 P1 cortex GTTAAAAAAA (2) GTTAAAAGAA (3) TTAAAAAAAA (2) 31.7 0.0317 Hypothalamus CTGTCTTCTG (2) GGAGGAGCTG (4) GTTAAAAAAA (2) GTTAAAAGAA (3) TATAATTTAT (4) TTAAAAAAAA (2) 39.8 0.0398 E12.5 retina CTGTCTTCTG (2) GAGGGAGCCC (6) GTTAAAAAAA (2) TTAAAAAAAA (2) 18.9 0.0189 E14.5 retina GTTAAAAAAA (2) TTAAAAAAAA (2) TTATTCTGTC (2) 38.2 0.0382 E16.5 retina CTGTCTTCTG (2) GGAGGAGCTG (4) GTTAAAAAAA (2) GTTAAAAGAA (3) TTAAAAAAAA (2) 39.8 0.0398 E18.5 retina CTGTCTTCTG (2) GTTAAAAAAA (2) GTTAAAAGAA (3) TTAAAAAAAA (2) 83.6 0.0836 P0.5 retina CTGTCTTCTG (2) GAGGGAGCCC (6) GTTAAAAAAA (2) GTTAAAAGAA (3) TTAAAAAAAA (2) 33.5 0.0335 P2.5 retina GAGGGAGCCC (6) GTTAAAAAAA (2) GTTAAAAGAA (3) TTAAAAAAAA (2) 52.8 0.0528 P4.5 retina GTTAAAAAAA (2) GTTAAAAGAA (3) TTAAAAAAAA (2) 65.4 0.0654 P6.5 retina GAGGGAGCCC (6) GTTAAAAAAA (2) TTAAAAAAAA (2) 33.4 0.0334 P10.5 crx- retina CTGTCTTCTG (2) GTTAAAAAAA (2) GTTAAAAGAA (3) TTAAAAAAAA (2) 26 0.026 P10.5 crx+ retina GTTAAAAAAA (2) GTTAAAAGAA (3) TTAAAAAAAA (2) TTATTCTGTC (2) 26.9 0.0269 Adult retinal CTGTCTTCTG (2) GGAGGAGCTG (4) TTAAAAAAAA (2) 11.2 0.0112 ONL GTTAAAAAAA (2) GTTAAAAGAA (3) TTAAAAAAAA (2) 13.4 0.0134