Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21539	A030012M09Rik	RIKEN cDNA A030012M09 gene	1		319263
Mm.21539	Cps1	carbamoyl-phosphate synthetase 1	1	1 43.4 cM	227231
Gene Ontology	carbamoyl-phosphate synthase (ammonia) activity
Human Homolog	CPS1[carbamoyl-phosphate synthetase 1, mitochondrial]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTAAAAAAAA (80) 13.1 0.0131 P8 Cb GC GTTAAAAAAA (26) 4.9 0.0049 P8 Cb GC GTTAAAAGAA (6) 1.6 0.0016 P8 Cb GC TATAATTTAT (5) 1.6 0.0016 Cb medulloblastoma TTAAAAAAAA (80) 53.2 0.0532 Cb medulloblastoma GTTAAAAAAA (26) 25.4 0.0254 P8 GC+1d culture TTAAAAAAAA (80) 28.5 0.0285 P8 GC+1d culture GTTAAAAAAA (26) 13.7 0.0137 P8 GC+1d culture CTGTCTTCTG (11) 3.4 0.0034 P8 GC+1d culture GAGGGAGCCC (10) 1.1 0.0011 P8 GC+1d culture GTTAAAAGAA (6) 1.1 0.0011 P8 GC+1d culture TATAATTTAT (5) 1.1 0.0011 P8 GC+SHH+1d culture TTAAAAAAAA (80) 34 0.034 P8 GC+SHH+1d culture GTTAAAAAAA (26) 16.4 0.0164 P8 GC+SHH+1d culture CTGTCTTCTG (11) 3.5 0.0035 P8 GC+SHH+1d culture GTTAAAAGAA (6) 2.3 0.0023 P8 GC+SHH+1d culture TTATTCTGTC (2) 1.2 0.0012 E15 cortex GGAGGAGCTG (5) 4.9 0.0049 E15 cortex TTAAAAAAAA (80) 4.9 0.0049 P1 cortex GTTAAAAGAA (6) 13.6 0.0136 P1 cortex TTAAAAAAAA (80) 13.6 0.0136 P1 cortex GTTAAAAAAA (26) 4.5 0.0045 Hypothalamus TTAAAAAAAA (80) 19.9 0.0199 Hypothalamus GTTAAAAAAA (26) 9.1 0.0091 Hypothalamus GTTAAAAGAA (6) 5.4 0.0054 Hypothalamus CTGTCTTCTG (11) 1.8 0.0018 Hypothalamus GGAGGAGCTG (5) 1.8 0.0018 Hypothalamus TATAATTTAT (5) 1.8 0.0018 E12.5 retina TTAAAAAAAA (80) 11.3 0.0113 E12.5 retina GTTAAAAAAA (26) 3.8 0.0038 E12.5 retina CTGTCTTCTG (11) 1.9 0.0019 E12.5 retina GAGGGAGCCC (10) 1.9 0.0019 E14.5 retina GTTAAAAAAA (26) 20 0.02 E14.5 retina TTAAAAAAAA (80) 16.4 0.0164 E14.5 retina TTATTCTGTC (2) 1.8 0.0018 E16.5 retina GTTAAAAAAA (26) 16.3 0.0163 E16.5 retina TTAAAAAAAA (80) 16.3 0.0163 E16.5 retina GTTAAAAGAA (6) 3.6 0.0036 E16.5 retina CTGTCTTCTG (11) 1.8 0.0018 E16.5 retina GGAGGAGCTG (5) 1.8 0.0018 E18.5 retina TTAAAAAAAA (80) 50.9 0.0509 E18.5 retina GTTAAAAAAA (26) 27.3 0.0273 E18.5 retina GTTAAAAGAA (6) 3.6 0.0036 E18.5 retina CTGTCTTCTG (11) 1.8 0.0018 P0.5 retina TTAAAAAAAA (80) 17.7 0.0177 P0.5 retina GTTAAAAGAA (6) 7.9 0.0079 P0.5 retina GTTAAAAAAA (26) 3.9 0.0039 P0.5 retina CTGTCTTCTG (11) 2 0.002 P0.5 retina GAGGGAGCCC (10) 2 0.002 P2.5 retina TTAAAAAAAA (80) 40.5 0.0405 P2.5 retina GTTAAAAAAA (26) 7 0.007 P2.5 retina GAGGGAGCCC (10) 3.5 0.0035 P2.5 retina GTTAAAAGAA (6) 1.8 0.0018 P4.5 retina TTAAAAAAAA (80) 47.6 0.0476 P4.5 retina GTTAAAAAAA (26) 11.9 0.0119 P4.5 retina GTTAAAAGAA (6) 5.9 0.0059 P6.5 retina TTAAAAAAAA (80) 16.7 0.0167 P6.5 retina GTTAAAAAAA (26) 15 0.015 P6.5 retina GAGGGAGCCC (10) 1.7 0.0017 P10.5 crx- retina TTAAAAAAAA (80) 13 0.013 P10.5 crx- retina GTTAAAAAAA (26) 5.6 0.0056 P10.5 crx- retina CTGTCTTCTG (11) 3.7 0.0037 P10.5 crx- retina GTTAAAAGAA (6) 3.7 0.0037 P10.5 crx+ retina GTTAAAAAAA (26) 15.4 0.0154 P10.5 crx+ retina TTAAAAAAAA (80) 5.8 0.0058 P10.5 crx+ retina GTTAAAAGAA (6) 3.8 0.0038 P10.5 crx+ retina TTATTCTGTC (2) 1.9 0.0019 Adult retinal TTAAAAAAAA (80) 7.4 0.0074 Adult retinal CTGTCTTCTG (11) 1.9 0.0019 Adult retinal GGAGGAGCTG (5) 1.9 0.0019 ONL TTAAAAAAAA (80) 7.7 0.0077 ONL GTTAAAAAAA (26) 3.8 0.0038 ONL GTTAAAAGAA (6) 1.9 0.0019