Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21630	Usp28	ubiquitin specific protease 28	9		235323
Gene Ontology	cysteine-type endopeptidase activity | peptidase activity | ubiquitin thiolesterase activity | ubiquitin-dependent protein catabolism
Human Homolog	USP28[ubiquitin specific protease 28]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (3) CTGATGAAGA (2) GGGAGGGAAG (2) TGTATGTGTG (3) 60.3 0.0603 Cb medulloblastoma CCTTTAATCC (3) GAGTCCATTC GGGAGGGAAG (2) 53.1 0.0531 P8 GC+1d culture CCTTTAATCC (3) CTGATGAAGA (2) GGAGGGAAGA GGGAGGGAAG (2) TGTATGTGTG (3) 40 0.04 P8 GC+SHH+1d culture CCTTTAATCC (3) GGAGGGAAGA GGGAGGGAAG (2) 31.7 0.0317 3T3 fibroblasts CCTTTAATCC (3) GGAGGGAAGA TTGAGGGCAG 77.1 0.0771 E15 cortex CCTTTAATCC (3) GGGAGGGAAG (2) 59.3 0.0593 P1 cortex CCTTTAATCC (3) GGAGGGAAGA TGTATGTGTG (3) 168.1 0.1681 Hypothalamus CCTTTAATCC (3) GAGTCCATTC GGAGGGAAGA GGGAGGGAAG (2) 34.4 0.0344 E12.5 retina CCTTTAATCC (3) CTGATGAAGA (2) GGAGGGAAGA GGGAGGGAAG (2) 88.3 0.0883 E14.5 retina CCTTTAATCC (3) CTGATGAAGA (2) GGAGGGAAGA GGGAGGGAAG (2) TGTATGTGTG (3) TTGAGGGCAG 136.6 0.1366 E16.5 retina CCTTTAATCC (3) GGAGGGAAGA GGGAGGGAAG (2) TGTATGTGTG (3) 76 0.076 E18.5 retina CCTTTAATCC (3) GGAGGGAAGA TGTATGTGTG (3) 32.7 0.0327 P0.5 retina CCTTTAATCC (3) CTGATGAAGA (2) GGAGGGAAGA GGGAGGGAAG (2) 80.5 0.0805 P2.5 retina CCTTTAATCC (3) CTGATGAAGA (2) CTGGTATTTT (2) GGAGGGAAGA GGGAGGGAAG (2) TTGAGGGCAG 96.9 0.0969 P4.5 retina CCTTTAATCC (3) CTGATGAAGA (2) GGAGGGAAGA GGGAGGGAAG (2) 59.5 0.0595 P6.5 retina CCTTTAATCC (3) CTGATGAAGA (2) CTGGTATTTT (2) GGAGGGAAGA GGGAGGGAAG (2) TTGAGGGCAG 88.4 0.0884 P10.5 crx- retina CCTTTAATCC (3) CTGATGAAGA (2) GGAGGGAAGA GGGAGGGAAG (2) 76.2 0.0762 P10.5 crx+ retina CCTTTAATCC (3) GAGTCCATTC GGAGGGAAGA GGGAGGGAAG (2) 49.9 0.0499 Adult retinal CCTTTAATCC (3) GGAGGGAAGA TGTATGTGTG (3) 133.4 0.1334 ONL CCTTTAATCC (3) CTGATGAAGA (2) GGGAGGGAAG (2) TGTATGTGTG (3) 95.8 0.0958