Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.216511	Scfd1	sec1 family domain containing 1	12		76983
Gene Ontology	endoplasmic reticulum | Golgi apparatus | protein transport | protein transporter activity | transport | vesicle-mediated transport
Human Homolog	SCFD1[sec1 family domain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTAACTGC GAAAAAGAAA (3) GAAGATGAAG (4) GAGATGAAGT (2) TAAAAAAAAA (3) TTGAATTAAA (2) 67 0.067 Cb medulloblastoma CCCTAACTGC GAGATGAAGT (2) TAAAAAAAAA (3) TCAATGTCTC (2) TTGAATTAAA (2) 122.5 0.1225 P8 GC+1d culture CCCTAACTGC TAAAAAAAAA (3) TCAATGTCTC (2) TTCCTGCAGT TTGAATTAAA (2) 84.3 0.0843 P8 GC+SHH+1d culture CCCTAACTGC GAAAAAGAAA (3) TAAAAAAAAA (3) TTCCTGCAGT TTGAATTAAA (2) 105.4 0.1054 3T3 fibroblasts TAAAAAAAAA (3) 7 0.007 E15 cortex CCCTAACTGC TAAAAAAAAA (3) 14.8 0.0148 P1 cortex CCCTAACTGC TAAAAAAAAA (3) 59.1 0.0591 Hypothalamus CCCTAACTGC TAAAAAAAAA (3) TTGAATTAAA (2) 45.3 0.0453 E12.5 retina CCCTAACTGC TAAAAAAAAA (3) TTCCTGCAGT TTGAATTAAA (2) 32 0.032 E14.5 retina CCCTAACTGC TAAAAAAAAA (3) TTGAATTAAA (2) 49.2 0.0492 E16.5 retina CCCTAACTGC TAAAAAAAAA (3) TTCCTGCAGT TTGAATTAAA (2) 39.8 0.0398 E18.5 retina CCCTAACTGC GAAAAAGAAA (3) TAAAAAAAAA (3) TTGAATTAAA (2) 129.1 0.1291 P0.5 retina TAAAAAAAAA (3) TTGAATTAAA (2) 43.2 0.0432 P2.5 retina CCCTAACTGC GAAAAAGAAA (3) TAAAAAAAAA (3) TCAATGTCTC (2) TTGAATTAAA (2) 95 0.095 P4.5 retina CCCTAACTGC GAGAATGAAA (6) TAAAAAAAAA (3) TCAATGTCTC (2) TTGAATTAAA (2) 146.7 0.1467 P6.5 retina CCCTAACTGC TAAAAAAAAA (3) TTCCTGCAGT TTGAATTAAA (2) 75.1 0.0751 P10.5 crx- retina CCCTAACTGC GAGAATGAAA (6) TAAAAAAAAA (3) TCAATGTCTC (2) TTGAATTAAA (2) 20.6 0.0206 P10.5 crx+ retina CCCTAACTGC TAAAAAAAAA (3) TTGAATTAAA (2) 30.7 0.0307 Adult retinal GAGAAGGAAA GAGATGAAGT (2) TAAAAAAAAA (3) TTGAATTAAA (2) 26 0.026 ONL GAGAAGGAAA TAAAAAAAAA (3) TTGAATTAAA (2) 40.1 0.0401