Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.218571	Colec12	collectin sub-family member 12	18		140792
Gene Ontology	immune response | integral to membrane | integral to membrane | phagocytosis, binding | receptor activity | scavenger receptor activity | sugar binding
Human Homolog	COLEC12[collectin sub-family member 12]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 87 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTTTGTGC (2) GAAAAATATT (3) GAGGCATTTC 6.5 0.0065 Cb medulloblastoma ATGAGGTCAA GAGGCATTTC GAGGGATGTT GAGTTTCTCT 13.8 0.0138 P8 GC+1d culture ATGAGGTCAA ATGTTTGTGC (2) GAAAAATATT (3) GACACATCTC GAGGCATTTC GAGTTTCTCT 14.7 0.0147 P8 GC+SHH+1d culture ATGTTTGTGC (2) GAAAAATATT (3) GAGGCATTTC GAGGGATGTT GAGTTTCTCT GGATAAAAAC 11.7 0.0117 3T3 fibroblasts ATGTTTGTGC (2) GAGGGATGTT GAGTTTCTCT 14 0.014 E15 cortex ATGTTTGTGC (2) GAGGCATTTC GAGGGATGTT 34.5 0.0345 P1 cortex ATGTTTGTGC (2) GAAAAATATT (3) 13.6 0.0136 Hypothalamus ATGTTTGTGC (2) GAAAAATATT (3) GACACATCTC GAGGCATTTC GAGTTTCTCT 25.4 0.0254 E12.5 retina GAAAAATATT (3) GACACATCTC GAGGCATTTC GAGGGATGTT GAGTTTCTCT 11.4 0.0114 E14.5 retina ATGTTTGTGC (2) GAAAAATATT (3) GAGGCATTTC GAGGGATGTT 67.4 0.0674 E16.5 retina ATGTTTGTGC (2) GAAAAATATT (3) GAGGCATTTC GAGGGATGTT GAGTTTCTCT 23.4 0.0234 E18.5 retina GAAAAATATT (3) GAGGCATTTC GAGGGATGTT 16.3 0.0163 P0.5 retina ATGTTTGTGC (2) GAAAAATATT (3) GAGGCATTTC GAGGGATGTT 11.9 0.0119 P2.5 retina ATGTTTGTGC (2) GAAAAATATT (3) GACACATCTC GAGGCATTTC GAGGGATGTT 21.1 0.0211 P4.5 retina GAAAAATATT (3) GACACATCTC GAGGGATGTT GGATAAAAAC 23.7 0.0237 P6.5 retina ATGTTTGTGC (2) GAAAAATATT (3) GACACATCTC GAGGCATTTC GAGGGATGTT 13.4 0.0134 P10.5 crx- retina ATGTTTGTGC (2) GAAAAATATT (3) GAGGCATTTC GAGGGATGTT 18.6 0.0186 P10.5 crx+ retina ATGTTTGTGC (2) GAAAAATATT (3) GACACATCTC GAGGCATTTC GAGGGATGTT 24.8 0.0248 Adult retinal ATGAGGTCAA ATGTTTGTGC (2) GACACATCTC GAGGCATTTC GAGGGATGTT 15 0.015 ONL ATGTTTGTGC (2) GAAAAATATT (3) GACACATCTC GAGGCATTTC GAGGGATGTT GGATAAAAAC 32.5 0.0325