Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2210	Abca2	ATP-binding cassette, sub-family A (ABC1), member 2	2	2 A2-B (2 12.6 cM)	11305
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of substances | integral to membrane | integral to plasma membrane | membrane | transport | transporter activity
Human Homolog	ABCA2[ATP-binding cassette, sub-family A (ABC1), member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAGGCCCTG (2) GCTTGAAGGG GGAGCAGGAC (3) TCCTATGAGC TGGCTTCCTC 21.2 0.0212 Cb medulloblastoma GGAGCAGGAC (3) TGGGTGGCAG 50.9 0.0509 P8 GC+1d culture GGAGCAGGAC (3) TCCTATGAGC TGGCTTCCTC 12.5 0.0125 P8 GC+SHH+1d culture GCTTGAAGGG GGAGCAGGAC (3) GTGGTGATGA 8.3 0.0083 3T3 fibroblasts CCAGGCCCTG (2) GCTTGAAGGG GTGGTGATGA TGGCTTCCTC 28 0.028 E15 cortex GCTTGAAGGG GGAGCAGGAC (3) 14.8 0.0148 P1 cortex GGAGCAGGAC (3) GTGGTGATGA 9 0.009 Hypothalamus CCAGGCCCTG (2) GCTTGAAGGG GGAGCAGGAC (3) TGGGTGGCAG 41.6 0.0416 E12.5 retina GCTTGAAGGG GGAGCAGGAC (3) GTAGCCTAAC 7.6 0.0076 E14.5 retina GCACAGGAGG GGAGCAGGAC (3) 5.4 0.0054 E16.5 retina GGAGCAGGAC (3) TCCTATGAGC TGGGTGGCAG 7.2 0.0072 E18.5 retina GGAGCAGGAC (3) TGGGTGGCAG 7.3 0.0073 P0.5 retina GGAGCAGGAC (3) 11.8 0.0118 P2.5 retina GGAGCAGGAC (3) 19.4 0.0194 P4.5 retina GGAGCAGGAC (3) GTGGTGATGA TGGCTTCCTC 13.9 0.0139 P6.5 retina GGAGCAGGAC (3) GTAGCCTAAC TGGGTGGCAG 36.7 0.0367 P10.5 crx- retina GCACAGGAGG GGAGCAGGAC (3) 37.2 0.0372 P10.5 crx+ retina GCACAGGAGG GGAGCAGGAC (3) TCCTATGAGC 21.1 0.0211 Adult retinal GCACAGGAGG GGAGCAGGAC (3) 7.5 0.0075 ONL GCACAGGAGG GGAGCAGGAC (3) 9.6 0.0096