| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AATAAAAAAA (3) CTTATGAAAA
| 207.1 | 0.2071 |
| Cb medulloblastoma | AAAAAAAAAA (2) AATAAAAAAA (3) AGCAAAAAAA (2) ATCAGAATAT (3)
| 830.1 | 0.8301 |
| P8 GC+1d culture | AAAAAAAAAA (2) AATAAAAAAA (3) AGCAAAAAAA (2)
| 206.5 | 0.2065 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AATAAAAAAA (3) AGCAAAAAAA (2) ATCAGAATAT (3) CTTATGAAAA
| 289.3 | 0.2893 |
| 3T3 fibroblasts | AAAAAAAAAA (2) AATAAAAAAA (3)
| 31.5 | 0.0315 |
| E15 cortex | AAAAAAAAAA (2) AATAAAAAAA (3) AGCAAAAAAA (2)
| 222.6 | 0.2226 |
| P1 cortex | AAAAAAAAAA (2)
| 245.4 | 0.2454 |
| Hypothalamus | AAAAAAAAAA (2) AATAAAAAAA (3) AGCAAAAAAA (2)
| 134 | 0.134 |
| E12.5 retina | AAAAAAAAAA (2) AATAAAAAAA (3)
| 142.7 | 0.1427 |
| E14.5 retina | AAAAAAAAAA (2) AATAAAAAAA (3) AGCAAAAAAA (2)
| 98.3 | 0.0983 |
| E16.5 retina | AAAAAAAAAA (2)
| 43.5 | 0.0435 |
| E18.5 retina | AAAAAAAAAA (2) AATAAAAAAA (3) AGCAAAAAAA (2)
| 385.6 | 0.3856 |
| P0.5 retina | AAAAAAAAAA (2)
| 117.8 | 0.1178 |
| P2.5 retina | AAAAAAAAAA (2) AGCAAAAAAA (2) ATCAGAATAT (3) CTTATGAAAA
| 341.5 | 0.3415 |
| P4.5 retina | AAAAAAAAAA (2) AATAAAAAAA (3) AGCAAAAAAA (2)
| 293.2 | 0.2932 |
| P6.5 retina | AAAAAAAAAA (2) AATAAAAAAA (3) AGCAAAAAAA (2)
| 276.8 | 0.2768 |
| P10.5 crx- retina | AAAAAAAAAA (2) CTTATGAAAA
| 46.5 | 0.0465 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AGCAAAAAAA (2)
| 103.8 | 0.1038 |
| Adult retinal | AAAAAAAAAA (2) AATAAAAAAA (3)
| 59.3 | 0.0593 |
| ONL | AAAAAAAAAA (2) AGCAAAAAAA (2) ATCAGAATAT (3)
| 109.1 | 0.1091 |