| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAC (2) GAAGACCCCA GCCAGCCAGG (2) GTAAGGGTTT GTCCAGACAC (5)
| 18 | 0.018 |
| Cb medulloblastoma | AAAAAAAAAC (2) GCCAGCCAGG (2) GGGAGTAATG (2) GTCCAGACAC (5)
| 13.8 | 0.0138 |
| P8 GC+1d culture | AAAAAAAAAC (2) CAACACGTTG GCCAGCCAGG (2) GGGAGTAATG (2) GTAAGGGTTT GTCCAGACAC (5)
| 18.1 | 0.0181 |
| P8 GC+SHH+1d culture | AAAAAAAAAC (2) GAAGACCCCA GCCAGCCAGG (2) GTCCAGACAC (5)
| 14.1 | 0.0141 |
| 3T3 fibroblasts | GCCAGCCAGG (2)
| 3.5 | 0.0035 |
| E15 cortex | AAAAAAAAAC (2) GAAGACCCCA GCCAGCCAGG (2) GTCCAGACAC (5)
| 39.5 | 0.0395 |
| P1 cortex | AAAAAAAAAC (2) GTCCAGACAC (5)
| 18.2 | 0.0182 |
| Hypothalamus | AAAAAAAAAC (2) GCCAGCCAGG (2) GGGAGTAATG (2) GTAAGGGTTT GTCCAGACAC (5)
| 14.4 | 0.0144 |
| E12.5 retina | GCCAGCCAGG (2) GGGAGTAATG (2) GTCCAGACAC (5)
| 7.6 | 0.0076 |
| E14.5 retina | AAAAAAAAAC (2) GCCAGCCAGG (2) GTAAGGGTTT
| 9.1 | 0.0091 |
| E16.5 retina | AAAAAAAAAC (2) CAACACGTTG GCCAGCCAGG (2) GTAAGGGTTT
| 12.6 | 0.0126 |
| E18.5 retina | AAAAAAAAAC (2) GCCAGCCAGG (2) GGGAGTAATG (2) GTAAGGGTTT
| 16.4 | 0.0164 |
| P0.5 retina | CAACACGTTG GCCAGCCAGG (2) GGGAGTAATG (2) GTCCAGACAC (5)
| 19.7 | 0.0197 |
| P2.5 retina | AAAAAAAAAC (2) CAACACGTTG GCCAGCCAGG (2) GGGAGTAATG (2)
| 22.9 | 0.0229 |
| P4.5 retina | AAAAAAAAAC (2) GCCAGCCAGG (2) GGGAGTAATG (2)
| 11.9 | 0.0119 |
| P6.5 retina | AAAAAAAAAC (2) CAACACGTTG GCCAGCCAGG (2) GGGAGTAATG (2) GTCCAGACAC (5)
| 18.4 | 0.0184 |
| P10.5 crx- retina | AAAAAAAAAC (2) GCCAGCCAGG (2) GTAAGGGTTT GTCCAGACAC (5)
| 16.8 | 0.0168 |
| P10.5 crx+ retina | GCCAGCCAGG (2) GGGAGTAATG (2) GTCCAGACAC (5)
| 7.6 | 0.0076 |
| Adult retinal | CAACACGTTG GAAGACCCCA GCCAGCCAGG (2) GGGAGTAATG (2) GTCCAGACAC (5)
| 22.3 | 0.0223 |
| ONL | CAACACGTTG
| 3.8 | 0.0038 |