Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.224246	9530056E24Rik	RIKEN cDNA 9530056E24 gene	2		319246
Mm.224246	Ptpra	protein tyrosine phosphatase, receptor type, A	2	2 73.5 cM	19262
Gene Ontology	hydrolase activity | insulin receptor signaling pathway | integral to membrane | phosphoprotein phosphatase activity | plasma membrane | protein amino acid dephosphorylation | protein amino acid phosphorylation | protein-tyrosine-phosphatase activity | receptor activity | transmembrane receptor protein tyrosine phosphatase signaling pathway
Human Homolog	PTPRA[protein tyrosine phosphatase, receptor type, A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAC (24) 4.9 0.0049 P8 Cb GC GTCCAGACAC (5) 4.9 0.0049 P8 Cb GC GCCAGCCAGG (10) 3.3 0.0033 P8 Cb GC GTAAGGGTTT (3) 3.3 0.0033 P8 Cb GC GAAGACCCCA (5) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAC (24) 4.6 0.0046 Cb medulloblastoma GTCCAGACAC (5) 4.6 0.0046 Cb medulloblastoma GCCAGCCAGG (10) 2.3 0.0023 Cb medulloblastoma GGGAGTAATG (2) 2.3 0.0023 P8 GC+1d culture GTCCAGACAC (5) 6.8 0.0068 P8 GC+1d culture GCCAGCCAGG (10) 5.7 0.0057 P8 GC+1d culture CAACACGTTG (5) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAC (24) 1.1 0.0011 P8 GC+1d culture GGGAGTAATG (2) 1.1 0.0011 P8 GC+1d culture GTAAGGGTTT (3) 1.1 0.0011 P8 GC+SHH+1d culture GTCCAGACAC (5) 5.9 0.0059 P8 GC+SHH+1d culture AAAAAAAAAC (24) 3.5 0.0035 P8 GC+SHH+1d culture GCCAGCCAGG (10) 3.5 0.0035 P8 GC+SHH+1d culture GAAGACCCCA (5) 1.2 0.0012 3T3 fibroblasts GCCAGCCAGG (10) 3.5 0.0035 E15 cortex GCCAGCCAGG (10) 19.8 0.0198 E15 cortex GTCCAGACAC (5) 9.9 0.0099 E15 cortex AAAAAAAAAC (24) 4.9 0.0049 E15 cortex GAAGACCCCA (5) 4.9 0.0049 P1 cortex AAAAAAAAAC (24) 9.1 0.0091 P1 cortex GTCCAGACAC (5) 9.1 0.0091 Hypothalamus GCCAGCCAGG (10) 5.4 0.0054 Hypothalamus GTAAGGGTTT (3) 3.6 0.0036 Hypothalamus AAAAAAAAAC (24) 1.8 0.0018 Hypothalamus GGGAGTAATG (2) 1.8 0.0018 Hypothalamus GTCCAGACAC (5) 1.8 0.0018 E12.5 retina GCCAGCCAGG (10) 3.8 0.0038 E12.5 retina GGGAGTAATG (2) 1.9 0.0019 E12.5 retina GTCCAGACAC (5) 1.9 0.0019 E14.5 retina GTAAGGGTTT (3) 5.5 0.0055 E14.5 retina AAAAAAAAAC (24) 1.8 0.0018 E14.5 retina GCCAGCCAGG (10) 1.8 0.0018 E16.5 retina GCCAGCCAGG (10) 7.2 0.0072 E16.5 retina AAAAAAAAAC (24) 1.8 0.0018 E16.5 retina CAACACGTTG (5) 1.8 0.0018 E16.5 retina GTAAGGGTTT (3) 1.8 0.0018 E18.5 retina GCCAGCCAGG (10) 5.5 0.0055 E18.5 retina GGGAGTAATG (2) 5.5 0.0055 E18.5 retina AAAAAAAAAC (24) 3.6 0.0036 E18.5 retina GTAAGGGTTT (3) 1.8 0.0018 P0.5 retina GCCAGCCAGG (10) 11.8 0.0118 P0.5 retina GTCCAGACAC (5) 3.9 0.0039 P0.5 retina CAACACGTTG (5) 2 0.002 P0.5 retina GGGAGTAATG (2) 2 0.002 P2.5 retina GCCAGCCAGG (10) 12.3 0.0123 P2.5 retina AAAAAAAAAC (24) 5.3 0.0053 P2.5 retina CAACACGTTG (5) 3.5 0.0035 P2.5 retina GGGAGTAATG (2) 1.8 0.0018 P4.5 retina GCCAGCCAGG (10) 5.9 0.0059 P4.5 retina GGGAGTAATG (2) 4 0.004 P4.5 retina AAAAAAAAAC (24) 2 0.002 P6.5 retina GCCAGCCAGG (10) 6.7 0.0067 P6.5 retina AAAAAAAAAC (24) 5 0.005 P6.5 retina GTCCAGACAC (5) 3.3 0.0033 P6.5 retina CAACACGTTG (5) 1.7 0.0017 P6.5 retina GGGAGTAATG (2) 1.7 0.0017 P10.5 crx- retina GTCCAGACAC (5) 7.4 0.0074 P10.5 crx- retina GTAAGGGTTT (3) 5.6 0.0056 P10.5 crx- retina AAAAAAAAAC (24) 1.9 0.0019 P10.5 crx- retina GCCAGCCAGG (10) 1.9 0.0019 P10.5 crx+ retina GTCCAGACAC (5) 3.8 0.0038 P10.5 crx+ retina GCCAGCCAGG (10) 1.9 0.0019 P10.5 crx+ retina GGGAGTAATG (2) 1.9 0.0019 Adult retinal GTCCAGACAC (5) 9.3 0.0093 Adult retinal CAACACGTTG (5) 3.7 0.0037 Adult retinal GCCAGCCAGG (10) 3.7 0.0037 Adult retinal GGGAGTAATG (2) 3.7 0.0037 Adult retinal GAAGACCCCA (5) 1.9 0.0019 ONL CAACACGTTG (5) 3.8 0.0038