Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.225096	Itga6	integrin alpha 6	2	2 38.0 cM	16403
Gene Ontology	basolateral plasma membrane | cell adhesion | cell-matrix adhesion | integral to membrane | integrin complex | integrin-mediated signaling pathway | plasma membrane | protein binding | receptor activity
Human Homolog	ITGA6[integrin, alpha 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTGTTGCTA 1.6 0.0016 Cb medulloblastoma GGTGTTGCTA 2.3 0.0023 P8 GC+1d culture GATCCCGACT (2) 1.1 0.0011 P8 GC+SHH+1d culture GGTGTTGCTA TGTAAAGTCT 3.5 0.0035 3T3 fibroblasts GTCATAGCTG (2) 10.5 0.0105 E15 cortex GTCATAGCTG (2) 4.9 0.0049 P1 cortex TGTAAAGTCT 4.5 0.0045 E12.5 retina ACATTCTTGT GATCCCGACT (2) GGTGTTGCTA 15.1 0.0151 E16.5 retina GATCCCGACT (2) GGTGTTGCTA TGTAAAGTCT 5.4 0.0054 E18.5 retina TATGTGAAAG 1.8 0.0018 P0.5 retina GTCATAGCTG (2) 3.9 0.0039 P2.5 retina GGTGTTGCTA GTCATAGCTG (2) 10.6 0.0106 P4.5 retina GATCCCGACT (2) GGTGTTGCTA GTCATAGCTG (2) 6 0.006 P6.5 retina GATCCCGACT (2) GGTGTTGCTA GTCATAGCTG (2) 11.6 0.0116 P10.5 crx- retina ACATTCTTGT GATCCCGACT (2) GGTGTTGCTA TATGTGAAAG 15 0.015 P10.5 crx+ retina ACATTCTTGT GATCCCGACT (2) GGTGTTGCTA TATGTGAAAG 21.1 0.0211 Adult retinal GTCATAGCTG (2) 1.9 0.0019 ONL GTCATAGCTG (2) TATGTGAAAG 7.6 0.0076