| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTTTTGAGTT (3) GATTTCTTTG (4)
| 11.5 | 0.0115 |
| Cb medulloblastoma | CTTTTGAGTT (3)
| 6.9 | 0.0069 |
| P8 GC+1d culture | CTTTTGAGTT (3) GAGAAAGTTT (2) GATTTCTTTG (4)
| 15.9 | 0.0159 |
| P8 GC+SHH+1d culture | CTTTTGAGTT (3) GATTTCTTGG GATTTCTTTG (4)
| 16.4 | 0.0164 |
| 3T3 fibroblasts | CCGTCCCCAC (2) TTCCAACAGT (2)
| 35 | 0.035 |
| E15 cortex | GAGAAAGTTT (2)
| 4.9 | 0.0049 |
| P1 cortex | TCTGTGCCCA (2)
| 4.5 | 0.0045 |
| Hypothalamus | CTTTTGAGTT (3) GATTTCTTGG
| 7.2 | 0.0072 |
| E12.5 retina | CTTTTGAGTT (3) GATTTCTTGG GATTTCTTTG (4)
| 13.2 | 0.0132 |
| E14.5 retina | CTTTTGAGTT (3) GATTTCTTGG GATTTCTTTG (4) TCTGTGCCCA (2)
| 14.5 | 0.0145 |
| E16.5 retina | CTTTTGAGTT (3) GATTTCTTTG (4)
| 7.2 | 0.0072 |
| E18.5 retina | CTTTTGAGTT (3) GATTTCTTGG GATTTCTTTG (4) TTCCAACAGT (2)
| 7.2 | 0.0072 |
| P0.5 retina | CTTTTGAGTT (3) GAGAAAGTTT (2) GATTTCTTGG GATTTCTTTG (4) TCTGTGCCCA (2)
| 15.8 | 0.0158 |
| P2.5 retina | CCGTCCCCAC (2) CTTTTGAGTT (3) GAGAAAGTTT (2) GATTTCTTGG GATTTCTTTG (4) TCTGTGCCCA (2)
| 14.2 | 0.0142 |
| P4.5 retina | CTTTTGAGTT (3) GATTTCTTTG (4) TCTGTGCCCA (2)
| 9.9 | 0.0099 |
| P6.5 retina | CTTTTGAGTT (3) GAGAAAGTTT (2) GATTTCTTGG GATTTCTTTG (4)
| 13.4 | 0.0134 |
| P10.5 crx- retina | CTTTTGAGTT (3) GATTTCTTGG TCTGTGCCCA (2) TTCCAACAGT (2)
| 22.3 | 0.0223 |
| P10.5 crx+ retina | CCGTCCCCAC (2) CTTTTGAGTT (3) GATTTCTTTG (4) TCTGTGCCCA (2)
| 11.4 | 0.0114 |
| Adult retinal | CTTTTGAGTT (3)
| 1.9 | 0.0019 |
| ONL | CTTTTGAGTT (3) GATTTCTTGG TCTGTGCCCA (2)
| 15.3 | 0.0153 |