| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCCAAAGAGT (7) CTGTCCGTTA (6) TCAAAAAAAA (2)
| 22.8 | 0.0228 |
| Cb medulloblastoma | CCCAAAGAGT (7) CTGTCCGTTA (6) TCAAAAAAAA (2) TGAAGTCCCA (7)
| 106.3 | 0.1063 |
| P8 GC+1d culture | CTGTCCGTTA (6) TCAAAAAAAA (2) TGAAGTCCCA (7)
| 21.7 | 0.0217 |
| P8 GC+SHH+1d culture | CCCAAAGAGT (7) CTGTCCGTTA (6) TCAAAAAAAA (2) TGAAGTCCCA (7)
| 58.6 | 0.0586 |
| 3T3 fibroblasts | CCACCGCCTC (2) CTGTCCGTTA (6) TCAAAAAAAA (2)
| 14 | 0.014 |
| E15 cortex | CCCAAAGAGT (7) CTGTCCGTTA (6) TCAAAAAAAA (2)
| 29.6 | 0.0296 |
| P1 cortex | CCCAAAGAGT (7) TCAAAAAAAA (2)
| 27.2 | 0.0272 |
| Hypothalamus | TCAAAAAAAA (2)
| 39.8 | 0.0398 |
| E12.5 retina | CCCAAAGAGT (7) TCAAAAAAAA (2)
| 20.7 | 0.0207 |
| E14.5 retina | CCCAAAGAGT (7) CTGTCCTGGG (6) TCAAAAAAAA (2)
| 45.5 | 0.0455 |
| E16.5 retina | CCCAAAGAGT (7) CTGTCCGTTA (6) TCAAAAAAAA (2) TGACACACAG (7)
| 27.1 | 0.0271 |
| E18.5 retina | CCCAAAGAGT (7) TCAAAAAAAA (2)
| 50.9 | 0.0509 |
| P0.5 retina | TCAAAAAAAA (2)
| 31.4 | 0.0314 |
| P2.5 retina | TCAAAAAAAA (2)
| 35.2 | 0.0352 |
| P4.5 retina | CCACCGCCTC (2) CCCAAAGAGT (7) CTGTCCGTTA (6) TCAAAAAAAA (2) TGACACACAG (7)
| 47.6 | 0.0476 |
| P6.5 retina | CCACCGCCTC (2) CTGTCCGTTA (6) CTGTCCTGGG (6) TCAAAAAAAA (2)
| 36.8 | 0.0368 |
| P10.5 crx- retina | CCCAAAGAGT (7) CTGTCCGTTA (6) TCAAAAAAAA (2)
| 24.2 | 0.0242 |
| P10.5 crx+ retina | CTGTCCTGGG (6) TCAAAAAAAA (2) TGACACACAG (7)
| 23 | 0.023 |
| Adult retinal | CTGTCCGTTA (6) TCAAAAAAAA (2)
| 27.8 | 0.0278 |
| ONL | CCCAAAGAGT (7) TCAAAAAAAA (2) TGACACACAG (7)
| 21 | 0.021 |