Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.227642	Rapgef5	Rap guanine nucleotide exchange factor (GEF) 5	12		217944
Gene Ontology	guanyl-nucleotide exchange factor activity | intracellular signaling cascade | nucleus | small GTPase mediated signal transduction
Human Homolog	RAPGEF5[Rap guanine nucleotide exchange factor (GEF) 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGATGAGCT ACTCTGCTGT CAGCTGAAAA (3) 8.2 0.0082 Cb medulloblastoma AAATAAAGCC (2) CAGCTGAAAA (3) GGAAAGGCTG TAAATATTAA 20.8 0.0208 P8 GC+1d culture CAGCTGAAAA (3) 1.1 0.0011 P8 GC+SHH+1d culture AAGATGAGCT CAGCTGAAAA (3) TAAATATTAA 4.7 0.0047 P1 cortex AAATAAAGCC (2) ACTCTGCTGT AGGGAGGGTG TCCTTGAAAT (2) 27.1 0.0271 Hypothalamus AAATAAAGCC (2) ACTCTGCTGT GGAAAGGCTG TCCTTGAAAT (2) 10.8 0.0108 E12.5 retina ATTGCAGACA GTTGCCTTCC TAAATATTAA TCTACTGTGT 7.6 0.0076 E14.5 retina AAGATGAGCT ATTGCAGACA 3.6 0.0036 E18.5 retina TAAATATTAA TCTACTGTGT 5.4 0.0054 P0.5 retina TCCTTGAAAT (2) TCTACTGTGT 4 0.004 P2.5 retina AAATAAAGCC (2) GGAAAGGCTG GGAACTTTGG GTTGCCTTCC TAAATATTAA 10.7 0.0107 P4.5 retina AGGGAGGGTG GGAAAGGCTG TAAATATTAA 6 0.006 P6.5 retina AAATAAAGCC (2) ACTCTGCTGT ATTGCAGACA CAGCTGAAAA (3) GGAAAGGCTG 10.1 0.0101 P10.5 crx- retina AAATAAAGCC (2) ACTCTGCTGT ATTGCAGACA TAAATATTAA TCCTTGAAAT (2) 11.3 0.0113 P10.5 crx+ retina ACTCTGCTGT CAGCTGAAAA (3) GGAAAGGCTG TAAATATTAA 17.2 0.0172 Adult retinal ACTCTGCTGT GTTGCCTTCC 5.6 0.0056 ONL AAATAAAGCC (2) ACTCTGCTGT GGAACTTTGG 15.2 0.0152