Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.227704	Vdac3	voltage-dependent anion channel 3	8	8 8.0 cM	22335
Gene Ontology	anion transport | behavioral fear response | integral to membrane | learning | mitochondrial outer membrane | mitochondrion | nerve-nerve synaptic transmission | outer membrane | porin activity | synaptic transmission | voltage-dependent ion-selective channel activity
Human Homolog	VDAC3[voltage-dependent anion channel 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACAGCTGGC GCCTTTTGTT GCTTTAATTA (3) GCTTTTGTTA TTTGTGCCAC (4) 32.6 0.0326 Cb medulloblastoma GCCTTTTGGT (3) GCCTTTTGTT GCTGGGCCTG GCTTTTGTTA 34.7 0.0347 P8 GC+1d culture GCCTTTTGTT GCTTTTGTTA 49.1 0.0491 P8 GC+SHH+1d culture GCCTTTTGTT GCTTTAATTA (3) GCTTTTGTTA 50.4 0.0504 E15 cortex GCCTTTTGTT GCTTTTGTTA 24.7 0.0247 P1 cortex GCCTTTTGTT GCTTTTGTTA 22.7 0.0227 Hypothalamus GCCTTTTGTT GCTGGGCCTG GCTTTTGTTA 32.6 0.0326 E12.5 retina GCCTTTTGTT GCTTTTGTTA 35.7 0.0357 E14.5 retina CCTTCCAGGA (2) GCCTTTTGGT (3) GCCTTTTGTT GCTTTTGTTA TTAAAGGAGC 43.7 0.0437 E16.5 retina CCTTCCAGGA (2) GACAGCTGGC GCCTTTTGTT GCTTTAATTA (3) GCTTTTGTTA 27.1 0.0271 E18.5 retina GCCTTTTGTT GCTTTTGTTA 29.1 0.0291 P0.5 retina GCCTTTTGGT (3) GCCTTTTGTT GCTTTTGTTA TTAAAGGAGC 21.6 0.0216 P2.5 retina GCCTTTTGTT GCTTTTGTTA 24.7 0.0247 P4.5 retina GCCTTTTGTT GCTTTTGTTA 39.6 0.0396 P6.5 retina GCCTTTTGTT GCTTTTGTTA 21.6 0.0216 P10.5 crx- retina GCCTTTTGTT GCTTTTGTTA 29.7 0.0297 P10.5 crx+ retina CCTTCCAGGA (2) GCCTTTTGTT GCTTTTGTTA 26.9 0.0269 Adult retinal CCTTCCAGGA (2) GCCTTTTGTT GCTTTTGTTA 13 0.013 ONL GCCTTTTGTT GCTTTTGTTA TTTGTGCCAC (4) 13.4 0.0134