Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.228071	C87129	expressed sequence C87129	2		97025
Mm.228071	5830435C13Rik	RIKEN cDNA 5830435C13 gene	2	2 36.0 cM	227940
Gene Ontology	DNA binding
Human Homolog	BAZ2B[bromodomain adjacent to zinc finger domain, 2B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATAAATTT (2) CTCAAGTGCT GAAAGTGGTG (3) TGAAATAAAA (3) TGCACACACA TGTACTTGAA 26.2 0.0262 Cb medulloblastoma GAAAGTGGTG (3) TCAAAGGAAA (2) TGAAATAAAA (3) TGCACACACA TGTACTTGAA 97.1 0.0971 P8 GC+1d culture AAATAAATTT (2) GATACAAATG TGAAATAAAA (3) TGCACACACA 14.7 0.0147 P8 GC+SHH+1d culture AAATAAATTT (2) GATACAAATG TCAAAGGAAA (2) TGCACACACA 23.4 0.0234 3T3 fibroblasts TGCACACACA 14 0.014 E15 cortex GAAAGTGGTG (3) TGAAATAAAA (3) 9.8 0.0098 P1 cortex TGAAATAAAA (3) TGCACACACA TGTACTTGAA 22.6 0.0226 Hypothalamus GAAAGTGGTG (3) TGAAATAAAA (3) TGCACACACA TGTACTTGAA 48.9 0.0489 E12.5 retina TGAAATAAAA (3) TGCACACACA 11.2 0.0112 E14.5 retina AAATAAATTT (2) GATACAAATG TGAAATAAAA (3) TGCACACACA 18.2 0.0182 E16.5 retina GATACAAATG TGAAATAAAA (3) TGCACACACA 23.6 0.0236 E18.5 retina AAATAAATTT (2) TGAAATAAAA (3) TGCACACACA TGTACTTGAA 20 0.02 P0.5 retina GAAAGTGGTG (3) TGCACACACA 4 0.004 P2.5 retina AAATAAATTT (2) GAAAGTGGTG (3) TGAAATAAAA (3) TGCACACACA TGTACTTGAA TGTCTCTGTC 12.5 0.0125 P4.5 retina AAATAAATTT (2) GAAAGTGGTG (3) TGAAATAAAA (3) TGCACACACA TGTACTTGAA 25.9 0.0259 P6.5 retina GATACAAATG TCAAAGGAAA (2) TGAAATAAAA (3) TGCACACACA TGTACTTGAA 21.8 0.0218 P10.5 crx- retina AAATAAATTT (2) TGAAATAAAA (3) TGCACACACA 9.3 0.0093 P10.5 crx+ retina GAAAGTGGTG (3) TGAAATAAAA (3) TGCACACACA 15.3 0.0153 Adult retinal GATACAAATG TCAAAGGAAA (2) TGAAATAAAA (3) TGCACACACA TGTACTTGAA TGTCTCTGTC 28 0.028 ONL CTCAAGTGCT GATACAAATG TCAAAGGAAA (2) TGAAATAAAA (3) TGCACACACA TGTCTCTGTC 38.2 0.0382