Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.234641	Rorb	RAR-related orphan receptor beta	4	19 B (4 38.0 cM)	225998
Gene Ontology	DNA binding | ligand-dependent nuclear receptor activity | nucleus | protein binding | receptor activity | regulation of transcription, DNA-dependent | steroid hormone receptor activity | transcription factor activity
Human Homolog	RORB[RAR-related orphan receptor B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 19 In Situ Hybridization Images

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SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCGCCTTTCT GAATAATAAA TACCCACACA (3) 172.9 0.1729 Cb medulloblastoma CAAAAGGAAA (2) GAATAATAAA TACCCACACA (3) TGAGTGTGTG (2) 159.5 0.1595 P8 GC+1d culture GAATAATAAA TACCCACACA (3) 150.7 0.1507 P8 GC+SHH+1d culture CAAAAGGAAA (2) GAATAATAAA 166.3 0.1663 3T3 fibroblasts GAATAATAAA 7 0.007 E15 cortex GAATAATAAA 9.9 0.0099 P1 cortex GAATAATAAA 113.6 0.1136 Hypothalamus GAATAATAAA 193.8 0.1938 E12.5 retina CCGCCTTTCT GAATAATAAA TACCCACACA (3) TGAGTGTGTG (2) 184 0.184 E14.5 retina GAATAATAAA TGAGTGTGTG (2) 182.2 0.1822 E16.5 retina CCGCCTTTCT GAATAATAAA 101.4 0.1014 E18.5 retina CCGCCTTTCT GAATAATAAA GGGACTTAAG TACCCACACA (3) 291 0.291 P0.5 retina GAATAATAAA 51 0.051 P2.5 retina GAATAATAAA GGGACTTAAG TACCCACACA (3) 112.6 0.1126 P4.5 retina CAAAAGGAAA (2) CCGCCTTTCT GAATAATAAA GGGACTTAAG 198.2 0.1982 P6.5 retina CAAAAGGAAA (2) GAATAATAAA TACCCACACA (3) 108.4 0.1084 P10.5 crx- retina CCGCCTTTCT GAATAATAAA GGGACTTAAG TACCCACACA (3) TGAGTGTGTG (2) 115.3 0.1153 P10.5 crx+ retina GAATAATAAA GGGACTTAAG TACCCACACA (3) TGAGTGTGTG (2) 59.6 0.0596 Adult retinal CCGCCTTTCT GAATAATAAA TACCCACACA (3) 14.9 0.0149 ONL GAATAATAAA GGGACTTAAG 49.8 0.0498