Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.234912	Plec1	plectin 1	15	15 D3 (15 44.0 cM)	18810
Gene Ontology	actin binding | cytoskeleton | insoluble fraction | muscle fiber | structural molecule activity
Human Homolog	PLEC1[plectin 1, intermediate filament binding protein 500kDa] | PLEC1[plectin 1, intermediate filament binding protein 500kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCTTTTCTT GGAAAGAAAA GGCGGGGCCC TTCCGCAAGT 13 0.013 Cb medulloblastoma ACCTTTTCTT GGAAAGAAAA GGCGGGGCCC 16.1 0.0161 P8 GC+1d culture ACCTTTTCTT CAGGAGGAGG (2) GGAAAGAAAA GGCGGGGCCC 23.8 0.0238 P8 GC+SHH+1d culture ACCTTTTCTT GGCGGGGCCC GGTGCTGCTG TTCCGCAAGT 23.5 0.0235 3T3 fibroblasts GGCGGGGCCC 28 0.028 E15 cortex GGAAAGAAAA 4.9 0.0049 P1 cortex ACCTTTTCTT GGCGGGGCCC 18.1 0.0181 Hypothalamus AACACTTCAA (2) ACCTTTTCTT GAGGGGCCAG GGCGGGGCCC 16.2 0.0162 E12.5 retina AAGCGCTCCC ACCTTTTCTT CAGGAGGAGG (2) 11.3 0.0113 E14.5 retina ACCTTTTCTT GAGGGGCCAG 23.7 0.0237 E16.5 retina AACACTTCAA (2) AAGCGCTCCC ACCTTTTCTT GGCGGGGCCC GGTGCTGCTG 21.7 0.0217 E18.5 retina ACCTTTTCTT GGAAAGAAAA GGCGGGGCCC 14.5 0.0145 P0.5 retina ACCTTTTCTT GGAAAGAAAA GGCGGGGCCC GGTGCTGCTG 25.6 0.0256 P2.5 retina AACACTTCAA (2) ACCTTTTCTT GAGGGGCCAG GGAAAGAAAA GGCGGGGCCC GGTGCTGCTG 26.6 0.0266 P4.5 retina AACACTTCAA (2) ACCTTTTCTT GGCGGGGCCC 29.7 0.0297 P6.5 retina AACACTTCAA (2) AAGCGCTCCC ACCTTTTCTT CAGGAGGAGG (2) GGCGGGGCCC 20.1 0.0201 P10.5 crx- retina AACACTTCAA (2) ACCTTTTCTT GAGGGGCCAG GGAAAGAAAA GGCGGGGCCC 37.2 0.0372 P10.5 crx+ retina ACCTTTTCTT CAGGAGGAGG (2) GGCGGGGCCC 13.5 0.0135 Adult retinal ACCTTTTCTT CAGGAGGAGG (2) GGCGGGGCCC 7.5 0.0075 ONL GGCGGGGCCC 3.8 0.0038