Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.234965	9130401L11Rik	RIKEN cDNA 9130401L11 gene	6		74555
Mm.234965	Foxp1	forkhead box P1	6		108655
Mm.234965	6030492E11Rik	RIKEN cDNA 6030492E11 gene	6		77726
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCTTCCATT AGCGCATTCT (3) GAAGAGTCCT GAGTGAACCT (3) GGGACTGTTA (3) TCATCCAATG (3) TGGGTTGTCT TTGATAATGG (3) TTTCTCTCAA (3) 595.3 0.5953 Cb medulloblastoma TGGGTTGTCT 235.9 0.2359 P8 GC+1d culture AATAACCACA (3) ACCGGCCTGG (2) ACCTTCCATT AGCGCATTCT (3) CTTAGTCTAA (3) GAGTGAACCT (3) TGGGTTGTCT 544.3 0.5443 P8 GC+SHH+1d culture AATAACCACA (3) AGCGCATTCT (3) GAGTGAACCT (3) GTGATGTCTA (4) TCAAAACATA TGGGTTGTCT TTTCTCTCAA (3) 537.6 0.5376 3T3 fibroblasts ACCGGCCTGG (2) GAAGAGTCCT GAGTGAACCT (3) GTAAAGAAGC TGGGTTGTCT 164.7 0.1647 E15 cortex CTTAGTCTAA (3) TGGGTTGTCT 277 0.277 P1 cortex AATAACCACA (3) AGCGCATTCT (3) GAGTGAACCT (3) GTAAAGAAGC TCATCCAATG (3) TGGGTTGTCT TTTCTCTCAA (3) 322.5 0.3225 Hypothalamus ACCGGCCTGG (2) TCAAAACATA TGGGTTGTCT 393 0.393 E12.5 retina AACCACCACA (2) AGCGCATTCT (3) GAAGAGTCCT GGGACTGTTA (3) GTGATGTCTA (4) TGGGTTGTCT TTGATAATGG (3) TTTCTCTCAA (3) 982.1 0.9821 E14.5 retina AGCGCATTCT (3) GAAGAGTCCT GAGTGAACCT (3) GTGATGTCTA (4) TGGGTTGTCT 1202.5 1.2025 E16.5 retina CTTAGTCTAA (3) GAAGAGTCCT GAGTGAACCT (3) TGGGTTGTCT 1242.4 1.2424 E18.5 retina AACCACCACA (2) ACCTTCCATT AGCGCATTCT (3) GAAGAGTCCT TCAAAACATA TGGGTTGTCT TTTCTCTCAA (3) 1769.7 1.7697 P0.5 retina AACCACCACA (2) AGCGCATTCT (3) GGGACTGTTA (3) TGGGTTGTCT 730.2 0.7302 P2.5 retina AACCACCACA (2) AGCGCATTCT (3) GAAGAGTCCT GTAAAGAAGC TGGGTTGTCT 725.1 0.7251 P4.5 retina TGGGTTGTCT TTGATAATGG (3) 758.9 0.7589 P6.5 retina AGCGCATTCT (3) TCAAAACATA TGGGTTGTCT TTGATAATGG (3) 365.2 0.3652 P10.5 crx- retina AATAACCACA (3) GAAGAGTCCT TGGGTTGTCT 213.7 0.2137 P10.5 crx+ retina TGGGTTGTCT TTGATAATGG (3) 321 0.321 Adult retinal TGGGTTGTCT 150 0.15 ONL ACCGGCCTGG (2) TGGGTTGTCT 149.4 0.1494