| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GGATTCTAGA (2)
| 1.6 | 0.0016 |
| Cb medulloblastoma | GGATTCTAGA (2) GGGGAAAACG
| 9.2 | 0.0092 |
| P8 GC+1d culture | GAGCCACTGA GGATTCTAGA (2) GGGGAAAACG
| 5.6 | 0.0056 |
| P8 GC+SHH+1d culture | GGATTCTAGA (2) GGGGAAAACG TTCCCGAAGT TTGGTCAAAG (2)
| 5.9 | 0.0059 |
| E15 cortex | GGGGAAAACG
| 4.9 | 0.0049 |
| P1 cortex | GGGGAAAACG
| 4.5 | 0.0045 |
| Hypothalamus | ATTTTTATTT (3) GGATTCTAGA (2) GGGAAGAAGA (4)
| 10.8 | 0.0108 |
| E12.5 retina | GGATTCTAGA (2) TTCCCGAAGT
| 5.7 | 0.0057 |
| E14.5 retina | GAGCCACTGA GGGAAGAAGA (4) GGGGAAAACG TTGGTCAAAG (2)
| 9 | 0.009 |
| E16.5 retina | GAGCCACTGA GGATTCTAGA (2)
| 3.6 | 0.0036 |
| E18.5 retina | GAAAAATAGT (3) GGATTCTAGA (2) TTGGTCAAAG (2)
| 5.4 | 0.0054 |
| P0.5 retina | GGGGAAAACG
| 3.9 | 0.0039 |
| P2.5 retina | CCGTTTGTGG (2) GGATTCTAGA (2) GGGGAAAACG
| 14 | 0.014 |
| P4.5 retina | GGATTCTAGA (2)
| 2 | 0.002 |
| P6.5 retina | ATTTTTATTT (3) GGATTCTAGA (2) TTGGTCAAAG (2)
| 8.4 | 0.0084 |
| P10.5 crx- retina | GGGGAAAACG
| 1.9 | 0.0019 |
| Adult retinal | CCGTTTGTGG (2) GAAAAATAGT (3)
| 3.8 | 0.0038 |
| ONL | ATTTTTATTT (3) GAAAAATAGT (3) GGATTCTAGA (2)
| 13.4 | 0.0134 |