Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.241700	A230085B16Rik	RIKEN cDNA A230085B16 gene			442823
Mm.241700	Gpm6a	glycoprotein m6a	8		234267
Gene Ontology	integral to membrane
Human Homolog	GPM6A[glycoprotein M6A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 114 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAATACAAA (2) AAATAAATTT (2) ACTAGTAGTT (2) ATGACTCCGC (2) CAGAAGTACG (3) GAAAAAAATA (3) GAAATAACTA (2) GAGTGCTTTG (2) GTTAATGTTT (2) TAACAGCTAC TTTCTTCTCT 120.7 0.1207 Cb medulloblastoma AAAATACAAA (2) ACTAGTAGTT (2) ATGACTCCGC (2) GAGTGCTTTG (2) TAACAGCTAC 124.8 0.1248 P8 GC+1d culture AAAATACAAA (2) AAAATACATA (2) AAATAAATTT (2) ACTAGTAGTT (2) AGTAATCAGA (2) ATGACTCCGC (2) ATTATGCATT (2) CAGAAGTACG (3) GAAATAACTA (2) GAGTGCTTTG (2) TAACAGCTAC TTTCTTCTCT 143.7 0.1437 P8 GC+SHH+1d culture AAAATACAAA (2) AAATAAATTT (2) ACTAGTAGTT (2) AGTAATCAGA (2) ATTATGCATT (2) CAGAAGTACG (3) GAAATAACTA (2) GAAGGAGATA GAGTGCTTTG (2) TAACAGCTAC TTTCTTCTCT 114.6 0.1146 E15 cortex GAGTGCTTTG (2) 34.6 0.0346 P1 cortex ACTAGTAGTT (2) ATTATGCATT (2) GAAATAACTA (2) GAGTGCTTTG (2) GAGTGTTTTG (2) TAACAGCTAC TTTCTTCTCT 63.4 0.0634 Hypothalamus AAAATACAAA (2) ACTAGTAGTT (2) CAGAAGTACG (3) GAAATAACTA (2) GAGTGCTTTG (2) TAACAGCTAC 74.2 0.0742 E12.5 retina AGTAATCAGA (2) CAGAAGTACG (3) GAAATAACTA (2) GAGTGCTTTG (2) TAACAGCTAC TTTCTTCTCT 26.3 0.0263 E14.5 retina AAATAAATTT (2) GAAATAACTA (2) GAAGGAGATA GAGTGCTTTG (2) GTTAATGTTT (2) TAACAGCTAC 19.9 0.0199 E16.5 retina AAAATACATA (2) GAAAAAAATA (3) GAAATAACTA (2) GAGTGCTTTG (2) TAACAGCTAC TTTCTTCTCT 30.7 0.0307 E18.5 retina AAATAAATTT (2) AGTAATCAGA (2) GAAAAAAATA (3) GAGTGCTTTG (2) TAACAGCTAC 45.4 0.0454 P0.5 retina AGTAATCAGA (2) GAGTGCTTTG (2) GAGTGTTTTG (2) TAACAGCTAC 29.6 0.0296 P2.5 retina AAAATACATA (2) AAATAAATTT (2) ACTAGTAGTT (2) GAGTGCTTTG (2) TAACAGCTAC 30 0.03 P4.5 retina AAAATACAAA (2) AAAATACATA (2) AAATAAATTT (2) GAGTGCTTTG (2) TAACAGCTAC 31.8 0.0318 P6.5 retina AAAATACATA (2) AGTAATCAGA (2) GAAATAACTA (2) GAGTGCTTTG (2) TAACAGCTAC 25.1 0.0251 P10.5 crx- retina AAATAAATTT (2) ATTATGCATT (2) GAAATAACTA (2) GAGTGCTTTG (2) GAGTGTTTTG (2) TAACAGCTAC TTTCTTCTCT 50.3 0.0503 P10.5 crx+ retina AAAATACAAA (2) AGTAATCAGA (2) GAAATAACTA (2) GAGTGCTTTG (2) TAACAGCTAC 51.8 0.0518 Adult retinal AAAATAGAAA ACTAGTAGTT (2) AGTAATCAGA (2) GAAATAACTA (2) GAGTGCTTTG (2) 35.3 0.0353 ONL AAAATAGAAA TAACAGCTAC 5.7 0.0057