| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAACAAGCC GAATTGGAAG (2) TTTAATCAAA
| 16.3 | 0.0163 |
| Cb medulloblastoma | AAAACAAGCC ATACATTTTA (2) GAATTGGAAG (2) TTTAATCAAA
| 13.8 | 0.0138 |
| P8 GC+1d culture | AAAACAAGCC AGAAGGGGCC CTGGCCTCAA (3) GAATTGGAAG (2) TTTAATCAAA
| 17.1 | 0.0171 |
| P8 GC+SHH+1d culture | AAAACAAGCC GAATTGGAAG (2) TTTAATCAAA
| 8.2 | 0.0082 |
| 3T3 fibroblasts | AAAACAAGCC AGAAGGGGCC GTCATAGCTG (2)
| 17.5 | 0.0175 |
| E15 cortex | AAGAGTGGCT (2) GAATTGGAAG (2) GTCATAGCTG (2)
| 14.7 | 0.0147 |
| P1 cortex | GAATTGGAAG (2) TTTAATCAAA
| 13.6 | 0.0136 |
| Hypothalamus | AAAACAAGCC CTGGCCTCAA (3) GAATTGGAAG (2) TTTAATCAAA
| 23.5 | 0.0235 |
| E12.5 retina | AAAACAAGCC GAATTGGAAG (2) TTTAATCAAA
| 16.9 | 0.0169 |
| E14.5 retina | AAAACAAGCC AGAAGGGGCC
| 7.3 | 0.0073 |
| E16.5 retina | CTGGCCTCAA (3) TTTAATCAAA
| 7.2 | 0.0072 |
| E18.5 retina | AAAACAAGCC GAATTGGAAG (2) TTTAATCAAA
| 10.9 | 0.0109 |
| P0.5 retina | AAAACAAGCC AGAAGGGGCC GTCATAGCTG (2) TTTAATCAAA
| 11.8 | 0.0118 |
| P2.5 retina | AAAACAAGCC GAATTGGAAG (2) GTCATAGCTG (2) TTTAATCAAA
| 14.1 | 0.0141 |
| P4.5 retina | AAAACAAGCC AAGAGTGGCT (2) AGAAGGGGCC ATACATTTTA (2) CTGGCCTCAA (3) GAATTGGAAG (2) GTCATAGCTG (2) TTTAATCAAA
| 18 | 0.018 |
| P6.5 retina | AAAACAAGCC AGAAGGGGCC GAATTGGAAG (2) GTCATAGCTG (2) TTTAATCAAA
| 15 | 0.015 |
| P10.5 crx- retina | AAAACAAGCC AGAAGGGGCC GAATTGGAAG (2) GCTGATTTTC
| 20.5 | 0.0205 |
| P10.5 crx+ retina | AAAACAAGCC AGAAGGGGCC CTGGCCTCAA (3) GAATTGGAAG (2)
| 17.3 | 0.0173 |
| Adult retinal | AAAACAAGCC AAGAGTGGCT (2) AGAAGGGGCC GTCATAGCTG (2) TTTAATCAAA
| 11.3 | 0.0113 |
| ONL | AAAACAAGCC CTGGCCTCAA (3) GAATTGGAAG (2) GTCATAGCTG (2) TTTAATCAAA
| 15.2 | 0.0152 |