Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.244820	Tbp	TATA box binding protein	17	17 A2 (17 8.25 cM)	21374
Gene Ontology	DNA binding | nucleus | protein binding | regulation of transcription, DNA-dependent | RNA polymerase I transcription factor complex | RNA polymerase II transcription factor activity | transcription | transcription factor activity | transcription factor complex | transcription factor TFIID complex | transcription initiation from Pol II promoter
Human Homolog	TBP[TATA box binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 14 In Situ Hybridization Images

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SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTTTTAAAT TGATCATACT TGGTGCACAT 14.6 0.0146 Cb medulloblastoma GCAGACAACT (2) TGATCATACT TGGTGCACAT 16.1 0.0161 P8 GC+1d culture AAGTGACACT GTTTTTAAAT TGATCATACT TGGTGCACAT 10.3 0.0103 P8 GC+SHH+1d culture AGAATAAGAG GTTTTTAAAT TGATCATACT TGGTGCACAT 62 0.062 E15 cortex TGGTGCACAT 4.9 0.0049 P1 cortex TGATCATACT 4.5 0.0045 Hypothalamus GCAGACAACT (2) GTTTTTAAAT TGATCATACT TGGTGCACAT 12.6 0.0126 E12.5 retina GTTTTTAAAT TGATCATACT TGGTGCACAT 11.4 0.0114 E14.5 retina GCAGACAACT (2) TGATCATACT TGGTGCACAT 16.4 0.0164 E16.5 retina GTTTTTAAAT TGATCATACT 21.7 0.0217 E18.5 retina TGATCATACT TGGTGCACAT 12.8 0.0128 P0.5 retina GTTTTTAAAT TGATCATACT 5.9 0.0059 P2.5 retina GTTTTTAAAT TGATCATACT TGGTGCACAT 22.8 0.0228 P4.5 retina TGATCATACT TGGTGCACAT 25.7 0.0257 P6.5 retina GTTTTTAAAT TGATCATACT TGGTGCACAT 11.6 0.0116 P10.5 crx- retina GTTTTTAAAT TGATCATACT TGGTGCACAT 11.2 0.0112 P10.5 crx+ retina GCAGACAACT (2) TGGTGCACAT 9.6 0.0096 Adult retinal AAGTGACACT GTTTTTAAAT TGATCATACT TGGTGCACAT 13 0.013 ONL AAGTGACACT AGAATAAGAG TGATCATACT TGGTGCACAT 13.4 0.0134