Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24495	Ddx54	DEAD (Asp-Glu-Ala-Asp) box polypeptide 54	5		71990
Gene Ontology	ATP binding | ATP dependent helicase activity | helicase activity | hydrolase activity | nucleic acid binding | nucleus | regulation of transcription, DNA-dependent | RNA binding
Human Homolog	DDX54[DEAD (Asp-Glu-Ala-Asp) box polypeptide 54]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAGGGTT CAAGTGTGGC (3) GGCCCTGAGT (2) TGCTGTTGGA 6.4 0.0064 P8 GC+1d culture AAAAAGGGTT CAAGTGTGGC (3) TGCTGTTGGA 3.3 0.0033 P8 GC+SHH+1d culture AAAAAGGGTT TGCTGTTGGA 4.6 0.0046 3T3 fibroblasts TGCTGTTGGA 3.5 0.0035 P1 cortex AAAAAGGGTT 9.1 0.0091 Hypothalamus AAAAAGGGTT 1.8 0.0018 E12.5 retina AAAAAGGGTT CAAGTGTGGC (3) TGCTGTTGGA 13.2 0.0132 E14.5 retina AAAAAGGGTT TGCTGTTGGA 5.4 0.0054 E16.5 retina TGCTGTTGGA 5.4 0.0054 P0.5 retina AAAAAGGGTT CAAGTGTGGC (3) TGCTGTTGGA 13.8 0.0138 P2.5 retina AAAAAGGGTT CAAGTGTGGC (3) TGCTGTTGGA 10.5 0.0105 P4.5 retina AAAAAGGGTT TGCTGTTGGA 4 0.004 P6.5 retina TGCTGTTGGA 3.3 0.0033 P10.5 crx- retina AAAAAGGGTT GGCCCTGAGT (2) TGCTGTTGGA 7.5 0.0075 P10.5 crx+ retina AAAAAGGGTT 1.9 0.0019 Adult retinal TGCTGTTGGA 1.9 0.0019 ONL GGCCCTGAGT (2) 1.9 0.0019