Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.245084	Vdr	vitamin D receptor	15	5 56.0 cM	22337
Gene Ontology	calcium ion homeostasis | calcium ion transport | development | DNA binding | ligand-dependent nuclear receptor activity | nucleus | organogenesis | receptor activity | regulation of transcription, DNA-dependent | skeletal development | steroid hormone receptor activity | transcription factor activity
Human Homolog	VDR[vitamin D (1,25- dihydroxyvitamin D3) receptor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) AAAACCAAAA TCTGACTTCC (2) 207.1 0.2071 Cb medulloblastoma AAAAAAAAAA (2) AAAACCAAAA GCAGCCAGCA (2) 802.4 0.8024 P8 GC+1d culture AAAAAAAAAA (2) TCTGACTTCC (2) 205.4 0.2054 P8 GC+SHH+1d culture AAAAAAAAAA (2) 278.7 0.2787 3T3 fibroblasts AAAAAAAAAA (2) TCTGACTTCC (2) 94.6 0.0946 E15 cortex AAAAAAAAAA (2) 212.8 0.2128 P1 cortex AAAAAAAAAA (2) 245.4 0.2454 Hypothalamus AAAAAAAAAA (2) AAAACCAAAA TCTGACTTCC (2) 126.8 0.1268 E12.5 retina AAAAAAAAAA (2) AAAACCAAAA 142.7 0.1427 E14.5 retina AAAAAAAAAA (2) AAAACCAAAA 98.3 0.0983 E16.5 retina AAAAAAAAAA (2) AAAACCAAAA 47.1 0.0471 E18.5 retina AAAAAAAAAA (2) 374.7 0.3747 P0.5 retina AAAAAAAAAA (2) AAAACCAAAA 119.8 0.1198 P2.5 retina AAAAAAAAAA (2) AAAACCAAAA 330.9 0.3309 P4.5 retina AAAAAAAAAA (2) 283.3 0.2833 P6.5 retina AAAAAAAAAA (2) 266.8 0.2668 P10.5 crx- retina AAAAAAAAAA (2) TCTGACTTCC (2) 46.5 0.0465 P10.5 crx+ retina AAAAAAAAAA (2) GCAGCCAGCA (2) 98 0.098 Adult retinal AAAAAAAAAA (2) AAAACCAAAA TCTGACTTCC (2) 61.2 0.0612 ONL AAAAAAAAAA (2) 103.4 0.1034