| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) TAAACACTGT
| 208.8 | 0.2088 |
| Cb medulloblastoma | AAAAAAAAAA (2) GAGACTGACA GAGGCGACAA (2) TAAACACTGT TGGGAGAGCC (2)
| 818.5 | 0.8185 |
| P8 GC+1d culture | AAAAAAAAAA (2) GAAACTGAAA (3) GAGGCGACAA (2) TAAACACTGT TGGGAAAGCC (2) TGGGAGAGCC (2)
| 223.6 | 0.2236 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) GAGGCGACAA (2) GCAGCTGTGA TAAACACTGT TGGGAAAGCC (2) TGGGAGAGCC (2)
| 295.1 | 0.2951 |
| 3T3 fibroblasts | AAAAAAAAAA (2) GAGACTGACA GAGGCGACAA (2)
| 35 | 0.035 |
| E15 cortex | AAAAAAAAAA (2) GCAGCTGTGA TGGGAGAGCC (2)
| 232.5 | 0.2325 |
| P1 cortex | AAAAAAAAAA (2) TAAACACTGT TGGGAGAGCC (2)
| 254.4 | 0.2544 |
| Hypothalamus | AAAAAAAAAA (2) GAGGCGACAA (2) TAAACACTGT TGGGAGAGCC (2)
| 134 | 0.134 |
| E12.5 retina | AAAAAAAAAA (2) GAAACTGAAA (3) TAAACACTGT TGGGAGAGCC (2)
| 157.7 | 0.1577 |
| E14.5 retina | AAAAAAAAAA (2) TAAACACTGT TATGTTTTTC (2) TGGGAGAGCC (2)
| 120.2 | 0.1202 |
| E16.5 retina | AAAAAAAAAA (2) GAAACTGAAA (3) TAAACACTGT TGGGAGAGCC (2)
| 52.5 | 0.0525 |
| E18.5 retina | AAAAAAAAAA (2) GAGACTGACA TAAACACTGT TGGGAGAGCC (2)
| 381.9 | 0.3819 |
| P0.5 retina | AAAAAAAAAA (2) GAAACTGAAA (3) GAGGCGACAA (2) TAAACACTGT TGGGAGAGCC (2)
| 129.6 | 0.1296 |
| P2.5 retina | AAAAAAAAAA (2) GAGGCGACAA (2) TAAACACTGT TGGGAGAGCC (2)
| 341.5 | 0.3415 |
| P4.5 retina | AAAAAAAAAA (2) GCAGCTGTGA TAAACACTGT TGGGAGAGCC (2)
| 301.2 | 0.3012 |
| P6.5 retina | AAAAAAAAAA (2) GAGGCGACAA (2) TAAACACTGT TGGGAGAGCC (2)
| 280.2 | 0.2802 |
| P10.5 crx- retina | AAAAAAAAAA (2) GAGGCGACAA (2) TAAACACTGT TGGGAGAGCC (2)
| 57.6 | 0.0576 |
| P10.5 crx+ retina | AAAAAAAAAA (2) GAAACTGAAA (3) GAGGCGACAA (2) TAAACACTGT TGGGAGAGCC (2)
| 111.4 | 0.1114 |
| Adult retinal | AAAAAAAAAA (2) GAGGCGACAA (2) GCAGCTGTGA TAAACACTGT TGGGAGAGCC (2)
| 76.1 | 0.0761 |
| ONL | AAAAAAAAAA (2) TAAACACTGT TATGTTTTTC (2) TGGGAAAGCC (2)
| 114.8 | 0.1148 |