| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GTCCCATCCA (2) TGAAAAAAAA (2)
| 29.3 | 0.0293 |
| Cb medulloblastoma | TGAAAAAAAA (2) TGGGCAAAAA (2)
| 80.9 | 0.0809 |
| P8 GC+1d culture | TGAAAAAAAA (2)
| 26.3 | 0.0263 |
| P8 GC+SHH+1d culture | GTCCCATCCA (2) TGAAAAAAAA (2) TGGGCAAAAA (2)
| 59.8 | 0.0598 |
| 3T3 fibroblasts | TGAAAAAAAA (2)
| 7 | 0.007 |
| E15 cortex | TGAAAAAAAA (2)
| 29.7 | 0.0297 |
| P1 cortex | TGAAAAAAAA (2)
| 4.5 | 0.0045 |
| Hypothalamus | GAGGCCATCC (2) TGAAAAAAAA (2)
| 43.4 | 0.0434 |
| E12.5 retina | GAGGCCATCC (2) TGAAAAAAAA (2)
| 33.8 | 0.0338 |
| E14.5 retina | GAGGCCATCC (2) GTCCCATCCA (2) TGAAAAAAAA (2)
| 52.8 | 0.0528 |
| E16.5 retina | TGAAAAAAAA (2)
| 16.3 | 0.0163 |
| E18.5 retina | TGAAAAAAAA (2)
| 74.6 | 0.0746 |
| P0.5 retina | TGAAAAAAAA (2)
| 15.7 | 0.0157 |
| P2.5 retina | GAGGCCATCC (2) GTCCCATCCA (2) TGAAAAAAAA (2)
| 45.8 | 0.0458 |
| P4.5 retina | TGAAAAAAAA (2) TGGGCAAAAA (2)
| 45.6 | 0.0456 |
| P6.5 retina | GAGGCCATCC (2) TGAAAAAAAA (2)
| 35 | 0.035 |
| P10.5 crx- retina | GTCCCATCCA (2) TGAAAAAAAA (2)
| 11.2 | 0.0112 |
| P10.5 crx+ retina | GTCCCATCCA (2) TGAAAAAAAA (2) TGGGCAAAAA (2)
| 23 | 0.023 |
| Adult retinal | TGAAAAAAAA (2) TGGGCAAAAA (2)
| 14.9 | 0.0149 |
| ONL | GAGGCCATCC (2) TGAAAAAAAA (2)
| 21.1 | 0.0211 |