| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAAAAAAAAA (2) GAGCAGGGGA
| 55.5 | 0.0555 |
| Cb medulloblastoma | CAAAAAAAAA (2) GAGCAGGGGA
| 111 | 0.111 |
| P8 GC+1d culture | CAAAAAAAAA (2) GAGCAGGGGA
| 45.7 | 0.0457 |
| P8 GC+SHH+1d culture | CAAAAAAAAA (2) CAGGTCTCTA GAGCAGGGGA TGATAGCAGC (2)
| 70.3 | 0.0703 |
| 3T3 fibroblasts | GAGCAGGGGA
| 3.5 | 0.0035 |
| E15 cortex | CAAAAAAAAA (2) GAGCAGGGGA
| 44.5 | 0.0445 |
| P1 cortex | CAAAAAAAAA (2)
| 22.7 | 0.0227 |
| Hypothalamus | CAAAAAAAAA (2) GAGCAGGGGA TGATAGCAGC (2)
| 47 | 0.047 |
| E12.5 retina | CAAAAAAAAA (2) GAGCAGGGGA
| 24.4 | 0.0244 |
| E14.5 retina | CAAAAAAAAA (2) GAGCAGGGGA TACAGACACA
| 25.5 | 0.0255 |
| E16.5 retina | CAAAAAAAAA (2) GAGCAGGGGA TACAGACACA
| 25.4 | 0.0254 |
| E18.5 retina | CAAAAAAAAA (2) GAGCAGGGGA
| 49.1 | 0.0491 |
| P0.5 retina | CAAAAAAAAA (2) GAGCAGGGGA
| 145.3 | 0.1453 |
| P2.5 retina | CAAAAAAAAA (2) CAGGTCTCTA GAGCAGGGGA GGCAAAGATA TACAGACACA
| 72.2 | 0.0722 |
| P4.5 retina | CAAAAAAAAA (2) GAGCAGGGGA TGATAGCAGC (2)
| 51.5 | 0.0515 |
| P6.5 retina | CAAAAAAAAA (2) GAGCAGGGGA GGCAAAGATA TACAGACACA
| 46.8 | 0.0468 |
| P10.5 crx- retina | CAAAAAAAAA (2) GAGCAGGGGA GGCAAAGATA
| 26 | 0.026 |
| P10.5 crx+ retina | CAAAAAAAAA (2) GAGCAGGGGA
| 61.5 | 0.0615 |
| Adult retinal | CAAAAAAAAA (2) CAGGTCTCTA GAGCAGGGGA
| 24.2 | 0.0242 |
| ONL | CAAAAAAAAA (2) TACAGACACA
| 19.1 | 0.0191 |