Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.247951
Efhd1
EF hand domain containing 1
1
98363
Gene Ontology
calcium ion binding
Human Homolog
EFHD1[EF hand domain containing 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 31 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAATGATCT
TTTTATTTAA (
3
)
4.9
0.0049
Cb medulloblastoma
ATTTAAAAGA (
2
)
CAAATGATCT
TTTTATTTAA (
3
)
9.2
0.0092
P8 GC+1d culture
CCCTCCCTTT
TTTTATTTAA (
3
)
4.5
0.0045
P8 GC+SHH+1d culture
TTTTATTTAA (
3
)
2.3
0.0023
P1 cortex
TTTTATTTAA (
3
)
9.1
0.0091
Hypothalamus
CAAATGATCT
TTTTATTTAA (
3
)
9
0.009
E12.5 retina
ATTTAAAAGA (
2
)
CAAATGATCT
TTTTATTTAA (
3
)
17
0.017
E14.5 retina
CCCTCCCTTT
TTTTATTTAA (
3
)
5.4
0.0054
E16.5 retina
CAAATGATCT
3.6
0.0036
E18.5 retina
CAAATGATCT
TTTTATTTAA (
3
)
7.2
0.0072
P0.5 retina
TTTTATTTAA (
3
)
2
0.002
P2.5 retina
CAAATGATCT
TTTTATTTAA (
3
)
5.3
0.0053
P4.5 retina
ATTTAAAAGA (
2
)
CAAATGATCT
CCCTCCCTTT
TTTTATTTAA (
3
)
21.9
0.0219
P6.5 retina
CAAATGATCT
TTTTATTTAA (
3
)
10
0.01
P10.5 crx- retina
ATTTAAAAGA (
2
)
TTTTATTTAA (
3
)
5.6
0.0056
P10.5 crx+ retina
TTTTATTTAA (
3
)
1.9
0.0019
