Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.248843	2510010K19Rik	RIKEN cDNA 2510010K19 gene	11		78332
Mm.248843	3110040D16Rik	RIKEN cDNA 3110040D16 gene	11		73158
Gene Ontology	biological_process unknown | cytoplasm | molecular_function unknown
Human Homolog	LARP[likely ortholog of mouse la related protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAACTCAGTC (2) CCCTTCTGCC (2) CTGAGGAGGG (3) GAGGTGGAGA (2) TATTGGCTCC (3) 13 0.013 Cb medulloblastoma CCCTTCTGCC (2) GAGGTGGAGA (2) TATTGGCTCC (3) TGCTAGGATA (2) 16.1 0.0161 P8 GC+1d culture CCCTTCTGCC (2) GCTGGAGGAG GGCGAGGAAG (3) TATTGGCTCC (3) TGCTAGGATA (2) 14.7 0.0147 P8 GC+SHH+1d culture TATTGGCTCC (3) TGCTAGGATA (2) 4.6 0.0046 E15 cortex CCCTTCTGCC (2) TATTGGCTCC (3) TGCTAGGATA (2) 14.7 0.0147 P1 cortex CCCTTCTGCC (2) TATTGGCTCC (3) 9 0.009 Hypothalamus CAACTCAGTC (2) GCTGGAGGAG TATTGGCTCC (3) TGCTAGGATA (2) 12.6 0.0126 E12.5 retina CCCTTCTGCC (2) GAGGTGGAGA (2) TATTGGCTCC (3) TGCTAGGATA (2) 7.6 0.0076 E14.5 retina TGCTAGGATA (2) 5.5 0.0055 E16.5 retina CCCTTCTGCC (2) CTGAGGAGGG (3) TATTGGCTCC (3) TGCTAGGATA (2) 10.8 0.0108 E18.5 retina CCCTTCTGCC (2) CTGAGGAGGG (3) GAGGTGGAGA (2) TATTGGCTCC (3) TGCTAGGATA (2) 10.8 0.0108 P0.5 retina CAACTCAGTC (2) CCCTTCTGCC (2) 9.9 0.0099 P2.5 retina TATTGGCTCC (3) TGCTAGGATA (2) 7 0.007 P4.5 retina TATTGGCTCC (3) 5.9 0.0059 P6.5 retina CCCTTCTGCC (2) GGCGAGGAAG (3) TATTGGCTCC (3) 15 0.015 P10.5 crx- retina CCCTTCTGCC (2) GCTGGAGGAG GGCGAGGAAG (3) TATTGGCTCC (3) TGCTAGGATA (2) 26 0.026 P10.5 crx+ retina GGCGAGGAAG (3) TATTGGCTCC (3) 9.6 0.0096 Adult retinal GAGGTGGAGA (2) GGCGAGGAAG (3) TGCTAGGATA (2) 13.1 0.0131 ONL GGCGAGGAAG (3) TATTGGCTCC (3) 5.7 0.0057