| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTTCTGTTC (4) TAGGGTACAG (3)
| 21.2 | 0.0212 |
| Cb medulloblastoma | TGCAATACTT (3)
| 2.3 | 0.0023 |
| P8 GC+1d culture | TAGGGTACAG (3) TGCAATACTT (3)
| 22.8 | 0.0228 |
| P8 GC+SHH+1d culture | TAGGGTACAG (3) TGAACGGGGC (3)
| 32.8 | 0.0328 |
| 3T3 fibroblasts | TAGGGTACAG (3)
| 14 | 0.014 |
| E15 cortex | TAGGGTACAG (3)
| 4.9 | 0.0049 |
| P1 cortex | TAGGGTACAG (3) TGAACGGGGC (3)
| 31.8 | 0.0318 |
| Hypothalamus | TAGGGTACAG (3)
| 5.4 | 0.0054 |
| E12.5 retina | TAGGGTACAG (3) TCCAATACTT (3) TGAACGGGGC (3)
| 15.1 | 0.0151 |
| E14.5 retina | ATTTCTGTTC (4) TAGGGTACAG (3) TCCAATACTT (3) TGAACGGGGC (3)
| 21.8 | 0.0218 |
| E16.5 retina | TAGGGTACAG (3) TCCAATACTT (3)
| 14.5 | 0.0145 |
| E18.5 retina | ATTTCTGTTC (4) TAGGGTACAG (3) TGCAATACTT (3)
| 10.9 | 0.0109 |
| P0.5 retina | TAGGGTACAG (3)
| 11.8 | 0.0118 |
| P2.5 retina | GGGACCTCTG TAGGGTACAG (3) TCCAATACTT (3) TGAACGGGGC (3)
| 19.5 | 0.0195 |
| P4.5 retina | GGGACCTCTG TAGGGTACAG (3)
| 11.9 | 0.0119 |
| P6.5 retina | GGCTTTTGAA (3) GGGACCTCTG TAGGGTACAA (3) TAGGGTACAG (3)
| 16.8 | 0.0168 |
| P10.5 crx- retina | TAGGGTACAA (3) TAGGGTACAG (3)
| 22.3 | 0.0223 |
| P10.5 crx+ retina | TAGGGTACAG (3)
| 9.6 | 0.0096 |
| Adult retinal | ATTTCTGTTC (4) TAGGGTACAG (3) TGAACGGGGC (3) TGCAATACTT (3)
| 9.4 | 0.0094 |
| ONL | GGCTTTTGAA (3) TAGGGTACAG (3)
| 7.6 | 0.0076 |