Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.250419	Ccni	cyclin I	5	5 E3.3-F1.3	12453
Gene Ontology	cyclin-dependent protein kinase regulator activity | regulation of cell cycle
Human Homolog	CCNI[cyclin I]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 3 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 180 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGTTTCCAG (2) AATCAGTGGC (3) ATAGAGAAGG GAAAAAAAAA (2) GAAAATGTGA (3) GTCAAAAAAA GTTCTGACTG TACTGCTGAT TCAAAAAAAA (2) TGCTTTATCA (2) TTTCTTTGGT TTTGTAATAT (3) 153.4 0.1534 Cb medulloblastoma AATCAGTGGC (3) GAAAAAAAAA (2) GTCAAAAAAA TACTGCTGAT TCAAAAAAAA (2) TGCTTTATCA (2) TTTCTTTGGT TTTGTAATAT (3) 337.4 0.3374 P8 GC+1d culture AATCAGTGGC (3) GAAAAAAAAA (2) GAAGCCCAGA (2) GGGAACCCCT GTCAAAAAAA GTTCTGACTG TACTGCTGAT TCAAAAAAAA (2) TCACAAAAAA TTTCTTTGGT TTTGTAATAT (3) 157.5 0.1575 P8 GC+SHH+1d culture AATCAGTGGC (3) GAAAAAAAAA (2) GAAGCCCAGA (2) GTCAAAAAAA GTTCTGACTG TACTGCTGAT TATGTAATAT (2) TCAAAAAAAA (2) TGCTTTATCA (2) TTTCTTTGGT TTTGTAATAT (3) 242.4 0.2424 3T3 fibroblasts AAGTTTCCAG (2) AATCAGTGGC (3) TCAAAAAAAA (2) TGCTTTATCA (2) TGGTGCTGGG (2) 21 0.021 E15 cortex GAAAAAAAAA (2) GTCAAAAAAA TACTGCTGAT TCAAAAAAAA (2) TCACAAAAAA TGCTTTATCA (2) 118.6 0.1186 P1 cortex GAAAAAAAAA (2) GGGAACCCCT GTCAAAAAAA TACTGCTGAT TCAAAAAAAA (2) TGCTTTATCA (2) TTTCTTTGGT 122.7 0.1227 Hypothalamus ATAGAGAAGG GAAAAAAAAA (2) GAAAATGTGA (3) GTCAAAAAAA GTTCTGACTG TACTGCTGAT TCAAAAAAAA (2) TCACAAAAAA TTTCTTTGGT TTTGTAATAT (3) 146.5 0.1465 E12.5 retina AATCAGTGGC (3) ATAGAGAAGG GAAAAAAAAA (2) GAAGCCCAGA (2) GGGAACCCCT GTATCCCTTT GTCAAAAAAA TACTGCTGAT TCAAAAAAAA (2) TGCTTTATCA (2) 116.5 0.1165 E14.5 retina GAAAAAAAAA (2) GAAAATGTGA (3) GGGAACCCCT GTCAAAAAAA GTTCTGACTG TACTGCTGAT TCAAAAAAAA (2) TCACAAAAAA TGCTTTATCA (2) TGGTGCTGGG (2) 123.7 0.1237 E16.5 retina AATCAGTGGC (3) ATAGAGAAGG GAAAAAAAAA (2) GGGAACCCCT GTCAAAAAAA TACTGCTGAT TCAAAAAAAA (2) TCACAAAAAA TGCTTTATCA (2) TGGTGCTGGG (2) TTTCTTTGGT 94 0.094 E18.5 retina AATCAGTGGC (3) GAAAAAAAAA (2) GGGAACCCCT GTCAAAAAAA TACTGCTGAT TCAAAAAAAA (2) TCACAAAAAA TGGTGCTGGG (2) TTTCTTTGGT 203.6 0.2036 P0.5 retina GAAAAAAAAA (2) GAAGCCCAGA (2) GGGAACCCCT GTATCCCTTT GTCAAAAAAA TACTGCTGAT TCAAAAAAAA (2) TGCTTTATCA (2) TTTCTTTGGT 123.7 0.1237 P2.5 retina ATAGAGAAGG GAAAAAAAAA (2) GGGAACCCCT GTCAAAAAAA TACTGCTGAT TCAAAAAAAA (2) TGCTTTATCA (2) TTTCTTTGGT TTTGTAATAT (3) 172.5 0.1725 P4.5 retina GAAAAAAAAA (2) GGGAACCCCT GTCAAAAAAA TACTGCTGAT TCAAAAAAAA (2) TGGTGCTGGG (2) TTTGTAATAT (3) 154.5 0.1545 P6.5 retina AATCAGTGGC (3) GAAAAAAAAA (2) GTCAAAAAAA GTTCTGACTG TACTGCTGAT TCAAAAAAAA (2) TGCTTTATCA (2) TTTCTTTGGT TTTGTAATAT (3) 118.3 0.1183 P10.5 crx- retina AAGTTTCCAG (2) ATAGAGAAGG GAAAAAAAAA (2) GTCAAAAAAA GTTCTGACTG TACTGCTGAT TATGTAATAT (2) TCAAAAAAAA (2) TCACAAAAAA 76.3 0.0763 P10.5 crx+ retina AATCAGTGGC (3) GAAAAAAAAA (2) GGGAACCCCT GTATCCCTTT GTCAAAAAAA TACTGCTGAT TCAAAAAAAA (2) TTTCTTTGGT TTTGTAATAT (3) 101.8 0.1018 Adult retinal GAAAAAAAAA (2) GGGAACCCCT GTCAAAAAAA TACTGCTGAT TCAAAAAAAA (2) TGCTTTATCA (2) TGGTGCTGGG (2) TTTCTTTGGT TTTGTAATAT (3) 67 0.067 ONL AATCAGTGGC (3) ATAGAGAAGG GAAAAAAAAA (2) GAAAATGTGA (3) GTCAAAAAAA TACTGCTGAT TCAAAAAAAA (2) TGGTGCTGGG (2) TTTGTAATAT (3) 66.9 0.0669