Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.252171	Snx2	sorting nexin 2	18		67804
Gene Ontology	intracellular protein transport | intracellular signaling cascade | protein transport | protein transporter activity | transport
Human Homolog	SNX2[sorting nexin 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTCTGGCAG TGGGTTTTTT (2) TTCAGCTCGA 99.6 0.0996 Cb medulloblastoma ACATTCTGCA ATTCTGGCAG TGGGTTTTTT (2) TTCAGCTCGA 37 0.037 P8 GC+1d culture ACATTCTGCA ATTCTGGCAG TGGGTTTTTT (2) TTCAGCTCGA 31.9 0.0319 P8 GC+SHH+1d culture ACATTCTGCA CAGCTTGTAA TGGGTTTTTT (2) TTCAGCTCGA 56.2 0.0562 3T3 fibroblasts ATTCTGGCAG TTCAGCTCGA 94.6 0.0946 E15 cortex ATTCTGGCAG TTCAGCTCGA 113.8 0.1138 P1 cortex TTCAGCTCGA 45.5 0.0455 Hypothalamus ACATTCTGCA ATTCTGGCAG CAGCTTGTAA TTCAGCTCGA 14.5 0.0145 E12.5 retina CAGCTTGTAA TTCAGCTCGA 20.7 0.0207 E14.5 retina ACATTCTGCA TTCAGCTCGA 9.1 0.0091 E16.5 retina ACATTCTGCA ATTCTGGCAG CAGCTTGTAA TTCAGCTCGA 19.9 0.0199 E18.5 retina ATTCTGGCAG GGGGGAAGGG TGGGTTTTTT (2) TTCAGCTCGA 30.8 0.0308 P0.5 retina ACATTCTGCA ATTCTGGCAG TTCAGCTCGA 98.1 0.0981 P2.5 retina ACATTCTGCA ATTCTGGCAG TGGGTTTTTT (2) TTCAGCTCGA 42.3 0.0423 P4.5 retina TGGGTTTTTT (2) TTCAGCTCGA 33.7 0.0337 P6.5 retina CAGCTTGTAA TTCAGCTCGA 28.4 0.0284 P10.5 crx- retina ACATTCTGCA ATTCTGGCAG GGGGGAAGGG TGGGTTTTTT (2) TTCAGCTCGA 76.3 0.0763 P10.5 crx+ retina ACATTCTGCA GGGGGAAGGG TGGGTTTTTT (2) TTCAGCTCGA 26.8 0.0268 Adult retinal ATTCTGGCAG GGGGGAAGGG TGGGTTTTTT (2) TTCAGCTCGA 57.5 0.0575 ONL ACATTCTGCA TTCAGCTCGA 26.8 0.0268