| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CGGATCTGCT (2) GAACCTTTTT (2) TCAAAAAAAA (2) TCAAAGCTCA TTCAAAAAAA (2)
| 37.5 | 0.0375 |
| Cb medulloblastoma | TCAAAAAAAA (2) TTCAAAAAAA (2)
| 136.4 | 0.1364 |
| P8 GC+1d culture | CCCACGAGCC (2) CTTTCCCATA TCAAAAAAAA (2) TTCAAAAAAA (2)
| 31.9 | 0.0319 |
| P8 GC+SHH+1d culture | CGGATCTGCT (2) GAACCTTTTT (2) TCAAAAAAAA (2) TCAAAGCTCA TTCAAAAAAA (2)
| 84.4 | 0.0844 |
| 3T3 fibroblasts | CTTTCCCATA TCAAAAAAAA (2) TCAAAGCTCA
| 14 | 0.014 |
| E15 cortex | TCAAAAAAAA (2) TTCAAAAAAA (2)
| 44.5 | 0.0445 |
| P1 cortex | CTTTCCCATA GAACCTTTTT (2) TCAAAAAAAA (2) TTCAAAAAAA (2)
| 40.8 | 0.0408 |
| Hypothalamus | CGGATCTGCT (2) TCAAAAAAAA (2) TCAAAGCTCA TTCAAAAAAA (2)
| 50.6 | 0.0506 |
| E12.5 retina | CTTTCCCATA GAACCTTTTT (2) TCAAAAAAAA (2) TTCAAAAAAA (2)
| 32 | 0.032 |
| E14.5 retina | CCCACGAGCC (2) CGGATCTGCT (2) TCAAAAAAAA (2) TCAAAGCTCA TTCAAAAAAA (2)
| 67.3 | 0.0673 |
| E16.5 retina | TCAAAAAAAA (2) TTCAAAAAAA (2)
| 27.2 | 0.0272 |
| E18.5 retina | TCAAAAAAAA (2) TTCAAAAAAA (2)
| 85.5 | 0.0855 |
| P0.5 retina | CGGATCTGCT (2) GAACCTTTTT (2) TCAAAAAAAA (2) TTCAAAAAAA (2)
| 47.1 | 0.0471 |
| P2.5 retina | CCCACGAGCC (2) CGGATCTGCT (2) CTTTCCCATA TCAAAAAAAA (2) TTCAAAAAAA (2)
| 49.3 | 0.0493 |
| P4.5 retina | CGGATCTGCT (2) TCAAAAAAAA (2) TTCAAAAAAA (2)
| 71.3 | 0.0713 |
| P6.5 retina | TCAAAAAAAA (2) TCAAAGCTCA TTCAAAAAAA (2)
| 43.3 | 0.0433 |
| P10.5 crx- retina | CCCACGAGCC (2) TCAAAAAAAA (2) TCAAAGCTCA TTCAAAAAAA (2)
| 24.3 | 0.0243 |
| P10.5 crx+ retina | TCAAAAAAAA (2) TTCAAAAAAA (2)
| 26.9 | 0.0269 |
| Adult retinal | CCCACGAGCC (2) TCAAAAAAAA (2) TTCAAAAAAA (2)
| 27.9 | 0.0279 |
| ONL | CTTTCCCATA TCAAAAAAAA (2) TTCAAAAAAA (2)
| 21 | 0.021 |