Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.257073	Chn1	chimerin (chimaerin) 1	2		108699
Gene Ontology	diacylglycerol binding | GTPase activator activity | intracellular signaling cascade
Human Homolog	CHN1[chimerin (chimaerin) 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 97 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGATCCCCAG ATAGACACCC GAAAAAAAAA (2) GCTTAATGTA (2) 50.5 0.0505 Cb medulloblastoma CAGTTATTAA GAAAAAAAAA (2) GCTTAATGTA (2) TAACCCCCAA TGGGGCCCTC 208 0.208 P8 GC+1d culture AGTCTGCAAA CAGTTATTAA GAAAAAAAAA (2) GCTTAATGTA (2) TGGGGCCCTC 47.9 0.0479 P8 GC+SHH+1d culture CAGTTATTAA GAAAAAAAAA (2) TTAAAAGAAA (2) 80.8 0.0808 E15 cortex CTTTGTATTT (2) GAAAAAAAAA (2) 59.3 0.0593 P1 cortex GAAAAAAAAA (2) TAACCCCCAA TTAAAAGAAA (2) 54.5 0.0545 Hypothalamus CAGTTATTAA CCATTGGTTT CTGGGTGACA (2) GAAAAAAAAA (2) TGGGGCCCTC 88.7 0.0887 E12.5 retina ATAGACACCC CAGTTATTAA GAAAAAAAAA (2) GCCGCCCTGA TATAAAGAAA (2) 58.2 0.0582 E14.5 retina AGTCTGCAAA CAGTTATTAA GAAAAAAAAA (2) GCTTAATGTA (2) 51 0.051 E16.5 retina AGATCCCCAG AGTCTGCAAA ATAGACACCC CAGTTATTAA CCATTGGTTT GAAAAAAAAA (2) GCCGCCCTGA TATAAAGAAA (2) 41.5 0.0415 E18.5 retina ATAGACACCC CAGTTATTAA CTTTGTATTT (2) GAAAAAAAAA (2) GCCGCCCTGA TAACCCCCAA 85.5 0.0855 P0.5 retina AGATCCCCAG CAGTTATTAA GAAAAAAAAA (2) GCTTAATGTA (2) TAACCCCCAA 49.1 0.0491 P2.5 retina ATAGACACCC CAGTTATTAA GAAAAAAAAA (2) GCTTAATGTA (2) TAACCCCCAA TGGGGCCCTC 100.4 0.1004 P4.5 retina ATAGACACCC CAGTTATTAA GAAAAAAAAA (2) TAACCCCCAA 63.4 0.0634 P6.5 retina AGATCCCCAG ATAGACACCC CAGTTATTAA CCATTGGTTT GAAAAAAAAA (2) GCCGCCCTGA GCTTAATGTA (2) TAACCCCCAA TGGGGCCCTC 71.9 0.0719 P10.5 crx- retina ATAGACACCC CAGTTATTAA GAAAAAAAAA (2) GCCGCCCTGA GCTTAATGTA (2) TAACCCCCAA 39.1 0.0391 P10.5 crx+ retina ATAGACACCC CAGTTATTAA CTGGGTGACA (2) CTTTGTATTT (2) GAAAAAAAAA (2) GCTTAATGTA (2) TAACCCCCAA 65.2 0.0652 Adult retinal AGTCTGCAAA CAGTTATTAA CTGGGTGACA (2) GAAAAAAAAA (2) TAACCCCCAA 24.3 0.0243 ONL CTGGGTGACA (2) GAAAAAAAAA (2) TAACCCCCAA TATAAAGAAA (2) TTAAAAGAAA (2) 32.5 0.0325