| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) GAAAAAAAAA (2) GAATAAAAAA GACCGTGGAG (4) GCTGCCTGGC (2) GCTTGGCTCC (2) TTTGTGGGGG (2)
| 265.9 | 0.2659 |
| Cb medulloblastoma | AAAAAAAAAA (2) GAAAAAAAAA (2) GAACAAAAAA GCTGCCTGGC (2) TTTGTGGGGG (2)
| 978.1 | 0.9781 |
| P8 GC+1d culture | AAAAAAAAAA (2) ACTGGCTGGT CCCTCCTGGC (2) GAAAAAAAAA (2) GAAGAAAAAA (3) GACCGTGGAG (4) GCACACCAGG (2) GCTGCCTGGC (2) GCTTGGCTCC (2) TTTGTGGGGG (2)
| 256.5 | 0.2565 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) ACTGGCTGGT CCCTCCTGGC (2) GAAAAAAAAA (2) GAACAAAAAA GAAGAAAAAA (3) GACCGTGGAG (4) GCACACCAGG (2) GCTGCCTGGC (2) GCTTGGCTCC (2) TTTGTGGGGG (2)
| 372.4 | 0.3724 |
| 3T3 fibroblasts | AAAAAAAAAA (2) CCCTCCTGGC (2) GACCGTGGAG (4) GCTTGGCTCC (2) GTCATAGCTG (2) TTTGTGGGGG (2)
| 56 | 0.056 |
| E15 cortex | AAAAAAAAAA (2) CCCTCCTGGC (2) GAAAAAAAAA (2) GACCGTGGAG (4) GCTTGGCTCC (2) GTCATAGCTG (2)
| 301.7 | 0.3017 |
| P1 cortex | AAAAAAAAAA (2) ACTGGCTGGT GAAAAAAAAA (2) GCTTGGCTCC (2) TTTGTGGGGG (2)
| 304.4 | 0.3044 |
| Hypothalamus | AAAAAAAAAA (2) GAAAAAAAAA (2) GAACAAAAAA GACCGTGGAG (4) GCTGCCTGGC (2) TTTGTGGGGG (2)
| 197.4 | 0.1974 |
| E12.5 retina | AAAAAAAAAA (2) GAAAAAAAAA (2) GAAGAAAAAA (3) GAATAAAAAA TTTGTGGGGG (2)
| 191.5 | 0.1915 |
| E14.5 retina | AAAAAAAAAA (2) GAAAAAAAAA (2) GAACAAAAAA GAAGAAAAAA (3) GCACACCAGG (2) GCTTGGCTCC (2)
| 138.3 | 0.1383 |
| E16.5 retina | AAAAAAAAAA (2) CCCTCCTGGC (2) GAAAAAAAAA (2) GACCGTGGAG (4) GCTTGGCTCC (2)
| 76 | 0.076 |
| E18.5 retina | AAAAAAAAAA (2) GAAAAAAAAA (2) GAACAAAAAA GAATAAAAAA
| 443.8 | 0.4438 |
| P0.5 retina | AAAAAAAAAA (2) GAAAAAAAAA (2) GCTTGGCTCC (2) GTCATAGCTG (2) TTTGTGGGGG (2)
| 162.9 | 0.1629 |
| P2.5 retina | AAAAAAAAAA (2) CCCTCCTGGC (2) GAAAAAAAAA (2) GAACAAAAAA GAAGAAAAAA (3) GCTTGGCTCC (2) GTCATAGCTG (2)
| 427.8 | 0.4278 |
| P4.5 retina | AAAAAAAAAA (2) CCCTCCTGGC (2) GAAAAAAAAA (2) GAACAAAAAA GCTGCCTGGC (2) GCTTGGCTCC (2) GTCATAGCTG (2) TTTGTGGGGG (2)
| 352.7 | 0.3527 |
| P6.5 retina | AAAAAAAAAA (2) CCCTCCTGGC (2) GAAAAAAAAA (2) GAACAAAAAA GAAGAAAAAA (3) GCTGCCTGGC (2) GCTTGGCTCC (2) GTCATAGCTG (2)
| 325.2 | 0.3252 |
| P10.5 crx- retina | AAAAAAAAAA (2) GAAAAAAAAA (2) GACCGTGGAG (4) GCTTGGCTCC (2)
| 68.7 | 0.0687 |
| P10.5 crx+ retina | AAAAAAAAAA (2) GAAAAAAAAA (2) GCTGCCTGGC (2) GCTTGGCTCC (2)
| 144.1 | 0.1441 |
| Adult retinal | AAAAAAAAAA (2) CCCTCCTGGC (2) GAAAAAAAAA (2) GACCGTGGAG (4) GCTTGGCTCC (2) GTCATAGCTG (2) TTTGTGGGGG (2)
| 92.8 | 0.0928 |
| ONL | AAAAAAAAAA (2) GAAAAAAAAA (2) GAAGAAAAAA (3) GCTGCCTGGC (2) GCTTGGCTCC (2) GTCATAGCTG (2) TTTGTGGGGG (2)
| 141.6 | 0.1416 |