Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.259751 9030622M22RikRIKEN cDNA 9030622M22 gene 8    74547 
 Mm.259751 Clcn3chloride channel 3 8  8 32.2 cM  12725 
 Gene Ontology chloride transport | integral to membrane | ion channel activity | ion transport | membrane | voltage-gated chloride channel activity | voltage-gated ion channel activity
 Human Homolog CLCN3[chloride channel 3]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAACTAAAAAA (2)
AAGAATGCTT (2)
ATACCTTCTG (2)
CATCCTTTTT (2)
TGAGATGATA (3)
TGTTTAGCAG
TTGCCCTGCA
19.50.0195
Cb medulloblastomaAACTAAAAAA (2)
AAGAATGCTT (2)
AGCCCTTTTA (2)
GTATCCACTA (2)
TGTTTAGCAG
25.30.0253
P8 GC+1d cultureAACTAAAAAA (2)
AAGAATGCTT (2)
ATACCTTCTG (2)
TGTTTAGCAG
TTAAACACTG (2)
7.90.0079
P8 GC+SHH+1d cultureAAAAGTGACG (2)
AACTAAAAAA (2)
AAGAATGCTT (2)
CATCCTTTTT (2)
GGGGAGTGGA
GTATCCACTA (2)
TGAGATGATA (3)
TGTTTAGCAG
130.013
3T3 fibroblastsGCCATTGGAG (3)
TTGCCCTGCA
140.014
E15 cortexATACCTTCTG (2)
GGGGAGTGGA
14.80.0148
P1 cortexAAGAATGCTT (2)
ATACCTTCTG (2)
GGGGAGTGGA
13.50.0135
HypothalamusAAAAGTGACG (2)
AAAGACAACA
AAGAATGCTT (2)
GCCATTGGAG (3)
GGGGAGTGGA
GTATCCACTA (2)
TGAGATGATA (3)
12.60.0126
E12.5 retinaAGCCCTTTTA (2)
GTATCCACTA (2)
TTGCCCTGCA
5.70.0057
E14.5 retinaAACTAAAAAA (2)
AAGAATGCTT (2)
ATACCTTCTG (2)
GGAAATGAGA
TGTTTAGCAG
27.30.0273
E16.5 retinaAAGAATGCTT (2)
ATACCTTCTG (2)
TGTTTAGCAG
90.009
E18.5 retinaAAAAGTGACG (2)
AAAGACAACA
AACTAAAAAA (2)
GCCATTGGAG (3)
TTGCCCTGCA
12.60.0126
P0.5 retinaAAAGACAACA
AGCCCTTTTA (2)
GGGGAGTGGA
GTATCCACTA (2)
TGTTTAGCAG
13.80.0138
P2.5 retinaAAGAATGCTT (2)
GTATCCACTA (2)
TGTTTAGCAG
5.40.0054
P4.5 retinaAAAAGTGACG (2)
AACTAAAAAA (2)
AAGAATGCTT (2)
AGCCCTTTTA (2)
80.008
P6.5 retinaAAAAGTGACG (2)
AAGAATGCTT (2)
AGCCCTTTTA (2)
GGGGAGTGGA
TGTTTAGCAG
200.02
P10.5 crx- retinaAAGAATGCTT (2)
ACCCATCTTC (2)
GTATCCACTA (2)
TGTTTAGCAG
TTAAACACTG (2)
27.90.0279
P10.5 crx+ retinaAAAAGTGACG (2)
AACTAAAAAA (2)
AAGAATGCTT (2)
ACCCATCTTC (2)
GTATCCACTA (2)
TGTTTAGCAG
TTGCCCTGCA
190.019
Adult retinalAAGAATGCTT (2)
1.90.0019
ONLAACTAAAAAA (2)
AAGAATGCTT (2)
ACCCATCTTC (2)
CATCCTTTTT (2)
GGAAATGAGA
TGAGATGATA (3)
TTAAACACTG (2)
17.10.0171