| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTTAATAAA GCCACTTCCT (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | ATTTAATAAA GAAGGAGGAA GCCACTTCCT (2)
| 9.2 | 0.0092 |
| P8 GC+1d culture | ACAGGCTCCT (5) ATTTAATAAA CTCCTTAGAG (6) GAAGGAGGAA GCCACTTCCT (2) GCGCTGGCCG (2)
| 27.4 | 0.0274 |
| P8 GC+SHH+1d culture | ACAGGCTCCT (5) CTCCTTAGAG (6) GCCACTTCCT (2)
| 12.9 | 0.0129 |
| 3T3 fibroblasts | GCGCTGGCCG (2)
| 3.5 | 0.0035 |
| E15 cortex | AACCCGAGTT (5) GCCACTTCCT (2)
| 19.7 | 0.0197 |
| P1 cortex | ACAGGCTCCT (5) ATTTAATAAA TCTGCTGATG (6)
| 22.6 | 0.0226 |
| Hypothalamus | ATTTAATAAA CTCCTTAGAG (6) GCCACTTCCT (2)
| 5.4 | 0.0054 |
| E12.5 retina | CTCCTTAGAG (6) GAAGGAGGAA GCCACTTCCT (2) TCTGCTGATG (6)
| 17 | 0.017 |
| E14.5 retina | ATTTAATAAA GCCACTTCCT (2)
| 5.4 | 0.0054 |
| E16.5 retina | ATTTAATAAA GAAGGAGGAA GCCACTTCCT (2)
| 7.2 | 0.0072 |
| E18.5 retina | ACAGGCTCCT (5) GCCACTTCCT (2)
| 3.6 | 0.0036 |
| P0.5 retina | CTCCTTAGAG (6) GCGCTGGCCG (2)
| 4 | 0.004 |
| P2.5 retina | ATTTAATAAA CTCCTTAGAG (6) GAAGGAGGAA GCCACTTCCT (2)
| 15.9 | 0.0159 |
| P4.5 retina | ACAGGCTCCT (5) ATTTAATAAA CTCCTTAGAG (6) GAAGGAGGAA GCCACTTCCT (2) TCTGCTGATG (6)
| 21.8 | 0.0218 |
| P6.5 retina | ACAGGCTCCT (5) ATTTAATAAA CTCCTTAGAG (6) GAAGGAGGAA
| 15 | 0.015 |
| P10.5 crx- retina | ACAGGCTCCT (5) ATTTAATAAA CTCCTTAGAG (6) GCCACTTCCT (2)
| 16.8 | 0.0168 |
| P10.5 crx+ retina | ATTTAATAAA CTCCTTAGAG (6)
| 3.8 | 0.0038 |
| Adult retinal | ACAGGCTCCT (5) GAAGGAGGAA
| 7.5 | 0.0075 |
| ONL | ACAGGCTCCT (5) ATTTAATAAA CTCCTTAGAG (6)
| 13.4 | 0.0134 |