| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATGTGTTCTG (3) TATCAAATAA (2)
| 3.2 | 0.0032 |
| Cb medulloblastoma | ATGTGTTCTG (3)
| 6.9 | 0.0069 |
| P8 GC+1d culture | ATGACTCACA ATGTGTTCTG (3) CCTCCCCCTC TATCAAATAA (2)
| 13.6 | 0.0136 |
| P8 GC+SHH+1d culture | ATGTGTTCTG (3) CAGCTACGGC (6) CCTCCCCCTC
| 5.9 | 0.0059 |
| 3T3 fibroblasts | ATGACTCACA ATGTGTTCTG (3) CCTCCCCCTC
| 14 | 0.014 |
| E15 cortex | CCTCCCCCTC
| 4.9 | 0.0049 |
| E12.5 retina | ATGACTCACA ATGTGTTCTG (3) CCTCCCCCTC
| 11.4 | 0.0114 |
| E14.5 retina | ATGACTCACA ATGTGTTCTG (3) CCTCCCCCTC TATCAAATAA (2)
| 12.7 | 0.0127 |
| E16.5 retina | AACAAAGACG (4) ATGTGTTCTG (3) CCTCCCCCTC
| 7.2 | 0.0072 |
| E18.5 retina | CCTCCCCCTC
| 7.3 | 0.0073 |
| P0.5 retina | AACAAAGACG (4) ATGTGTTCTG (3) CCTCCCCCTC TATCAAATAA (2)
| 21.7 | 0.0217 |
| P2.5 retina | ATGACTCACA CCTCCCCCTC
| 5.3 | 0.0053 |
| P4.5 retina | ATGTGTTCTG (3) CAGCTACGGC (6) CCTCCCCCTC
| 6 | 0.006 |
| P6.5 retina | ATGTGTTCTG (3) CCTCCCCCTC TATCAAATAA (2)
| 13.3 | 0.0133 |
| P10.5 crx- retina | AACAAAGACG (4) ATGTGTTCTG (3) CCTCCCCCTC
| 7.5 | 0.0075 |
| P10.5 crx+ retina | ATGTGTTCTG (3) CAGCTACGGC (6) CCTCCCCCTC TATCAAATAA (2)
| 19.1 | 0.0191 |
| Adult retinal | AACAAAGACG (4) ATGGCTTTGA (4) ATGTGTTCTG (3) CCTCCCCCTC
| 22.3 | 0.0223 |
| ONL | ATGACTCACA ATGGCTTTGA (4) ATGTGTTCTG (3) TATCAAATAA (2)
| 23 | 0.023 |