Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.262707	0610013E23Rik	RIKEN cDNA 0610013E23 gene	11		76892
Mm.262707	Rps6kb1	ribosomal protein S6 kinase, polypeptide 1	11	11 C	72508
Gene Ontology	ATP binding | cytosolic ribosome (sensu Eukarya) | germ-cell development | kinase activity | protein serine/threonine kinase activity | ribosome biogenesis | structural constituent of ribosome | transferase activity
Human Homolog	RPS6KB1[ribosomal protein S6 kinase, 70kDa, polypeptide 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 9 In Situ Hybridization Images

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SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCACTGTGC TGCAGACAAA (4) TTACCATATT (2) TTTATAGTTC (3) 68.6 0.0686 Cb medulloblastoma GCAGCCACGG TCCACTGTGC TTTATAGTTC (3) 34.6 0.0346 P8 GC+1d culture GCAGCCACGG TCCACTGTGC TGACTCAACA (2) TGCAGACAAA (4) TTACCATATT (2) 41 0.041 P8 GC+SHH+1d culture CTTGTACCAG (2) TCCACTGTGC TGCAGACAAA (4) TTACCATATT (2) TTTATAGTTC (3) 56.2 0.0562 3T3 fibroblasts GCAGATGACT (2) TCCACTGTGC 70.1 0.0701 E15 cortex TCCACTGTGC TGCAGACAAA (4) 14.8 0.0148 P1 cortex TCCACTGTGC 22.7 0.0227 Hypothalamus TCCACTGTGC TGCAGACAAA (4) TTACCATATT (2) 34.4 0.0344 E12.5 retina CTTGTACCAG (2) GCAGATGACT (2) TCCACTGTGC TGCAGACAAA (4) TTACCATATT (2) 58.3 0.0583 E14.5 retina AAGATGCTGG (3) TCCACTGTGC TGCAGACAAA (4) 43.7 0.0437 E16.5 retina CTTGTACCAG (2) TCCACTGTGC 97.8 0.0978 E18.5 retina TCCACTGTGC TTACCATATT (2) 58.2 0.0582 P0.5 retina AAGATGCTGG (3) TCCACTGTGC TGCAGACAAA (4) TTTATAGTTC (3) 68.7 0.0687 P2.5 retina CTTGTACCAG (2) TCCACTGTGC TCCCAATGAG TGCAGACAAA (4) TTTATAGTTC (3) 77.4 0.0774 P4.5 retina AAGATGCTGG (3) GCAGATGACT (2) TCCACTGTGC TGCAGACAAA (4) 35.7 0.0357 P6.5 retina TCCACTGTGC TGCAGACAAA (4) 25 0.025 P10.5 crx- retina TCCACTGTGC TGACTCAACA (2) 59.5 0.0595 P10.5 crx+ retina CTTGTACCAG (2) GCAGCCACGG TCCACTGTGC TGCAGACAAA (4) 51.8 0.0518 Adult retinal TCCACTGTGC TGACTCAACA (2) TGCAGACAAA (4) 16.7 0.0167 ONL GCAGATGACT (2) TCCACTGTGC TGACTCAACA (2) TGCAGACAAA (4) 15.3 0.0153