Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.26272	D1Ertd53e	DNA segment, Chr 1, ERATO Doi 53, expressed	1	1 30.1 cM	52084
Mm.26272	C130065N10Rik	RIKEN cDNA C130065N10 gene	1		319340
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 87 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGATGCAG (2) CAGCAACCTT CCTTTAATCC (3) TTATTTGTAT 65.3 0.0653 Cb medulloblastoma AATGATGCAG (2) CAGCAACCTT CCTTTAATCC (3) 50.8 0.0508 P8 GC+1d culture AATGATGCAG (2) CAAAGGAGAT (3) CAGCAACCTT CCTTTAATCC (3) TAGACATTTT (4) TGAGCCATTA (2) TTATTTGTAT 58.2 0.0582 P8 GC+SHH+1d culture AATGATGCAG (2) CAAAGGAGAT (3) CAGCAACCTT CCTTTAATCC (3) TTATTTGTAT 49.1 0.0491 3T3 fibroblasts CCTTTAATCC (3) 70.1 0.0701 E15 cortex AATGATGCAG (2) CCTTTAATCC (3) 59.3 0.0593 P1 cortex AATGATGCAG (2) CAGCAACCTT CCTTTAATCC (3) 163.5 0.1635 Hypothalamus CAGCAACCTT CCAGAAATAA (4) CCTTTAATCC (3) TAACAGACTG (2) TGAGCCATTA (2) TTATTTGTAT 30.7 0.0307 E12.5 retina AATGATGCAG (2) CAGCAACCTT CCTTTAATCC (3) TTATTTGTAT 95.8 0.0958 E14.5 retina AATGATGCAG (2) CAGCAACCTT CCTTTAATCC (3) 134.9 0.1349 E16.5 retina AATGATGCAG (2) CAGCAACCTT CCAGAAATAA (4) CCTTTAATCC (3) 96 0.096 E18.5 retina AATGATGCAG (2) CAGCAACCTT CCTTTAATCC (3) TAGACATTTT (4) TTATTTGTAT 43.6 0.0436 P0.5 retina AATGATGCAG (2) CAGCAACCTT CCTTTAATCC (3) 84.4 0.0844 P2.5 retina AATGATGCAG (2) CAGCAACCTT CCTTTAATCC (3) TAGACATTTT (4) TGAGCCATTA (2) TTATTTGTAT 95.1 0.0951 P4.5 retina AATGATGCAG (2) CAGCAACCTT CCTTTAATCC (3) TAGACATTTT (4) TTATTTGTAT 81.3 0.0813 P6.5 retina AATGATGCAG (2) CAGCAACCTT CCTTTAATCC (3) TAACAGACTG (2) TGAGCCATTA (2) TTATTTGTAT 91.7 0.0917 P10.5 crx- retina CAGCAACCTT CCTTTAATCC (3) TAACAGACTG (2) TGAGCCATTA (2) TTATTTGTAT 76.3 0.0763 P10.5 crx+ retina AATGATGCAG (2) CAGCAACCTT CCTTTAATCC (3) TGAGCCATTA (2) TTATTTGTAT 59.5 0.0595 Adult retinal CAAAGGAGAT (3) CAGCAACCTT CCTTTAATCC (3) TGAGCCATTA (2) 146.3 0.1463 ONL AATGATGCAG (2) CAAAGGAGAT (3) CAGCAACCTT CCAGAAATAA (4) CCTTTAATCC (3) TGAGCCATTA (2) 111.1 0.1111