| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) CCTTCCAAGA
| 205.5 | 0.2055 |
| Cb medulloblastoma | AAAAAAAAAA (2) CCTTCCAAAA CCTTCCAAGA
| 802.4 | 0.8024 |
| P8 GC+1d culture | AAAAAAAAAA (2) CCTTCCAAGA CTCAGAAGCT
| 207.7 | 0.2077 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) CCTTCCAAGA CTCAGAAGCT
| 283.4 | 0.2834 |
| 3T3 fibroblasts | AAAAAAAAAA (2) CCTTCCAAGA CTCAGAAGCT
| 38.5 | 0.0385 |
| E15 cortex | AAAAAAAAAA (2) CTCAGAAGCT
| 217.7 | 0.2177 |
| P1 cortex | AAAAAAAAAA (2) CTCAGAAGCT
| 249.9 | 0.2499 |
| Hypothalamus | AAAAAAAAAA (2)
| 123.2 | 0.1232 |
| E12.5 retina | AAAAAAAAAA (2) GGCAGGTGGG (2)
| 140.8 | 0.1408 |
| E14.5 retina | AAAAAAAAAA (2) CCTTCCAAGA
| 96.5 | 0.0965 |
| E16.5 retina | AAAAAAAAAA (2) CCTTCCAAGA GGCAGGTGGG (2)
| 50.7 | 0.0507 |
| E18.5 retina | AAAAAAAAAA (2) CCTTCCAAGA GGCAGGTGGG (2)
| 378.3 | 0.3783 |
| P0.5 retina | AAAAAAAAAA (2) TGTGGGGGTG
| 121.7 | 0.1217 |
| P2.5 retina | AAAAAAAAAA (2) CCTTCCAAAA CCTTCCAAGA GGCAGGTGGG (2)
| 337.9 | 0.3379 |
| P4.5 retina | AAAAAAAAAA (2) CCTTCCAAAA CCTTCCAAGA TGTGGGGGTG
| 291.3 | 0.2913 |
| P6.5 retina | AAAAAAAAAA (2)
| 266.8 | 0.2668 |
| P10.5 crx- retina | AAAAAAAAAA (2) CCTTCCAAGA
| 50.2 | 0.0502 |
| P10.5 crx+ retina | AAAAAAAAAA (2) CCTTCCAAGA GGCAGGTGGG (2)
| 99.9 | 0.0999 |
| Adult retinal | AAAAAAAAAA (2) CCTTCCAAGA CTCAGAAGCT
| 63 | 0.063 |
| ONL | AAAAAAAAAA (2) CCTTCCAAGA
| 107.2 | 0.1072 |