Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.26870	Phf6	PHD finger protein 6	X		70998
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent
Human Homolog	PHF6[PHD finger protein 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACTTAATT (3) ATGCATTCCT (2) GGTCAAAAAT GTGGATTTTC (2) TTTGTTTTCT (2) 14.7 0.0147 Cb medulloblastoma AAACTTAATT (3) GGTCAAAAAT GTGGATTTTC (2) TTTGTTTTCT (2) 27.7 0.0277 P8 GC+1d culture GGTCAAAAAT GTGGATTTTC (2) TTTGTTTTCT (2) 17.1 0.0171 P8 GC+SHH+1d culture AAACTTAATT (3) GGTCAAAAAT GTGGATTTTC (2) TTTGTTTTCT (2) 21.1 0.0211 E15 cortex GGTCAAAAAT GTGGATTTTC (2) TTTGTTTTCT (2) 24.6 0.0246 P1 cortex GGTCAAAAAT TTTGTTTTCT (2) 9 0.009 Hypothalamus AAACTTAATT (3) AAATTAATTT (2) GGTCAAAAAT GTGGATTTTC (2) TTTGTTTTCT (2) 12.6 0.0126 E12.5 retina AAACTTAATT (3) ACATTATTTG ATGCATTCCT (2) GTGGATTTTC (2) 13.2 0.0132 E14.5 retina AAACTTAATT (3) 5.5 0.0055 E16.5 retina AAACTTAATT (3) GGTCAAAAAT TTTGTTTTCT (2) 14.5 0.0145 E18.5 retina AAACTTAATT (3) ACATTATTTG GGTCAAAAAT GTGGATTTTC (2) TTTGTTTTCT (2) 9 0.009 P0.5 retina TTTGTTTTCT (2) 2 0.002 P2.5 retina GTGGATTTTC (2) TTTGTTTTCT (2) 5.3 0.0053 P4.5 retina AAACTTAATT (3) 2 0.002 P6.5 retina AAACTTAATT (3) AAATTAATTT (2) GGTCAAAAAT GTGGATTTTC (2) TTTGTTTTCT (2) 15 0.015 P10.5 crx- retina AAACTTAATT (3) AAATTAATTT (2) GTGGATTTTC (2) TTTGTTTTCT (2) 13.1 0.0131 P10.5 crx+ retina ACATTATTTG GGTCAAAAAT TTGTTTCTTC (2) TTTGTTTTCT (2) 9.5 0.0095 Adult retinal TTGTTTCTTC (2) TTTGTTTTCT (2) 7.5 0.0075 ONL AAACTTAATT (3) ATGCATTCCT (2) 3.8 0.0038