Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.270088	2210409B22Rik	RIKEN cDNA 2210409B22 gene	4		70174
Mm.270088	AW547365	expressed sequence AW547365	4		100434
Mm.270088	1700060J05Rik	RIKEN cDNA 1700060J05 gene	4		73391
Mm.270088	9130223C08Rik	RIKEN cDNA 9130223C08 gene	4		77708
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTGAGAG (5) ATGCAGGGAT (5) TAACTTGTAG (6) TGCTCGCAAT (4) 27.7 0.0277 Cb medulloblastoma ATGCAGGGAT (5) CATTTGTCAG (4) TAACTTGTAG (6) TGCTCGCAAT (4) 13.8 0.0138 P8 GC+1d culture AAGCTGAGAG (5) CAAGGGGCAG GTGTTTGTGA TAACTTGTAG (6) TGCTCGCAAT (4) 33 0.033 P8 GC+SHH+1d culture AGCTTTGAAA (4) CAAGGGGCAG GATCATAGCT (4) TAACTTGTAG (6) TGCTCGCAAT (4) 29.3 0.0293 3T3 fibroblasts AAGCTGAGAG (5) CAAGGGGCAG TAACTTGTAG (6) TGCTCGCAAT (4) 14 0.014 E15 cortex TAACTTGTAG (6) TGCTCGCAAT (4) 19.7 0.0197 P1 cortex AAGCTGAGAG (5) GTGTTTGTGA TAACTTGTAG (6) 13.5 0.0135 Hypothalamus CAAGGGGCAG GATCATAGCT (4) TAACTTGTAG (6) 27.1 0.0271 E12.5 retina ATGCAGGGAT (5) TAACTTGTAG (6) 24.4 0.0244 E14.5 retina TAACTTGTAG (6) 18.2 0.0182 E16.5 retina TAACTTGTAG (6) 21.7 0.0217 E18.5 retina GTGTTTGTGA TAACTTGTAG (6) 54.5 0.0545 P0.5 retina CAAGGGGCAG TAACTTGTAG (6) TGCTCGCAAT (4) 21.7 0.0217 P2.5 retina ATGCAGGGAT (5) CAAGGGGCAG TAACTTGTAG (6) TGCTCGCAAT (4) 37 0.037 P4.5 retina ATGCAGGGAT (5) CAAGGGGCAG GATCATAGCT (4) TAACTTGTAG (6) 51.6 0.0516 P6.5 retina AAGCTGAGAG (5) AGCTTTGAAA (4) ATGCAGGGAT (5) TAACTTGTAG (6) TGCTCGCAAT (4) 36.7 0.0367 P10.5 crx- retina ATGCAGGGAT (5) TAACTTGTAG (6) 18.6 0.0186 P10.5 crx+ retina AGCTTTGAAA (4) CAAGGGGCAG CATTTGTCAG (4) TAACTTGTAG (6) TGCTCGCAAT (4) 28.7 0.0287 Adult retinal CAAGGGGCAG TAACTTGTAG (6) TGCTCGCAAT (4) 16.7 0.0167 ONL AAGCTGAGAG (5) GATCATAGCT (4) TAACTTGTAG (6) TGCTCGCAAT (4) 21 0.021